/*
 * Copyright 2013-2019, Derrick Wood, Jennifer Lu <jlu26@jhmi.edu>
 *
 * This file is part of the Kraken taxonomic sequence classification system.
 *
 * Kraken is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * Kraken is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with Kraken.  If not, see <http://www.gnu.org/licenses/>.
 */

#ifndef KRAKEN_HEADERS_HPP
#define KRAKEN_HEADERS_HPP

#ifndef _XOPEN_SOURCE
#define _XOPEN_SOURCE 1
#endif

#include <cstdio>
#include <cstdlib>
#include <cstring>
#include <err.h>
#include <errno.h>
#include <fcntl.h>
#include <fstream>
#include <iostream>
#include <map>
#include <omp.h>
#include <set>
#include <sstream>
#include <stdint.h>
#include <string.h>
#include <string>
#include <sys/mman.h>
#include <sys/stat.h>
#include <sys/time.h>
#include <sys/types.h>
#include <sysexits.h>
#include <unistd.h>
#include <vector>

#endif
