@Test
public void testParseOutputSettings() {

    OutputSettings outputSettings = instance.parseOutputSettings(Paths.get("src/test/resources/analysisExample.yml"));
    OutputSettings expected = OutputSettings.builder()
            .outputContributingVariantsOnly(false)
            .numberOfGenesToShow(0)
            .outputPrefix("results/Pfeiffer-hiphive")
            .outputFormats(EnumSet.of(OutputFormat.TSV_GENE, OutputFormat.TSV_VARIANT, OutputFormat.VCF, OutputFormat.HTML))
            .build();
    assertThat(outputSettings, equalTo(expected));
}