@Test
public void testResolveOverlap2() throws Exception {

    logger.debug("Test case with neither bond nor atom overlap");
    String filename = "data/cml/overlaptest2.cml";
    InputStream ins = this.getClass().getClassLoader().getResourceAsStream(filename);
    CMLReader reader = new CMLReader(ins);
    IChemFile chemFile = (IChemFile) reader.read(new ChemFile());
    IAtomContainer atomContainer = (IAtomContainer) ChemFileManipulator.getAllAtomContainers(chemFile).get(0);
    //MoleculeViewer2D.display(new AtomContainer(atomContainer), false);
    double score = new OverlapResolver().getOverlapScore(atomContainer, new Vector(), new Vector());
    Assert.assertEquals(0.0, score, 0.0001);
    logger.debug("End of test case with neither bond nor atom overlap");
}