	@Test
	public void testExonDuplicationOma1() {

		final SVTandemDuplication svDup = new SVTandemDuplication(
			new GenomePosition(jvData.getRefDict(), Strand.FWD, oma1.getChr(), 58968128),
			new GenomePosition(jvData.getRefDict(), Strand.FWD, oma1.getChr(), 58994820),
			0, 0, 0, 0
		);
		final SVAnnotation anno = new SVTandemDuplicationAnnotationBuilder(oma1, svDup).build();

		Assert.assertEquals(anno.getTranscript().toString(), "NM_145243.3(1:g.58946391_59012446)");
		Assert.assertEquals(
			"SVTandemDuplication{genomePos=1:g.58968129, genomePos2=1:g.58994821, posCILowerBound=0, " +
				"posCIUpperBound=0, pos2CILowerBound=0, pos2CIUpperBound=0}",
			anno.getVariant().toString()
		);
		Assert.assertEquals(
			"[TRANSCRIPT_AMPLIFICATION, DIRECT_TANDEM_DUPLICATION, STRUCTURAL_VARIANT, " +
				"CODING_TRANSCRIPT_VARIANT]",
			anno.getEffects().toString()
		);
	}