Q: How uncountable is the set of countable ordinals? From the answers (and comments) to this question on the uncountability of countable ordinals I don't get a lucid picture: 

How can I see that the uncountability of the set of countable ordinals
  is exactly at most the uncountability of the reals – and no bigger one?

(Assuming the continuum hypothesis, it cannot be a smaller one.)
I mean: We are shown that there are so tremendously many countable ordinals, and that they can get really tremendously large (in terms of "greater than their predecessors"), so one can lose the plot.

A: To add a little bit to Asaf's answer, there are a couple of reasons why it is difficult to "see" (meaning visualize) the fact that $|\omega_1| \le |\mathbb{R}|$.  By this fact I mean the existence of an injection $\omega_1 \to \mathbb{R}$.
First, some fragment of the Axiom of Choice (more than the principle of Dependent Choices) is needed to prove this.  There are models of $\mathsf{ZF} + \mathsf{DC}$ in which neither $\omega_1$ nor $\mathbb{R}$ injects into the other, meaning that the two sets are incomparable in cardinality.  Constructions that make fundamental use of the Axiom of Choice beyond $\mathsf{DC}$, such as the Banach–Tarski paradox, tend to be hard to visualize.
Second, even assuming $\mathsf{AC}$ there cannot be an order-preserving injection $\omega_1 \to \mathbb{R}$.  In other words, no set of reals with its usual ordering can be isomorphic to $\omega_1$.  This is because if $f: \omega_1 \to \mathbb{R}$ were an order-preserving injection then the open intervals $(f(\alpha),f(\alpha+1))$ for $\alpha < \omega_1$ would all be disjoint—but because $\mathbb{R}$ is separable it has the countable chain condition, meaning that every pairwise disjoint family of open sets in $\mathbb{R}$ is countable.  For me it is difficult to visualize any linear ordering that does not embed into the real line.
By the way, in order to answer the question in the title, "how uncountable is the set of countable ordinals," I'm not sure that a comparison with the set of reals will be helpful; the parallel question "how uncountable is the set of reals" can be thought of as a harder question (the Continuum Hypothesis.)  To answer the question in the title it might be better to study the construction of $\omega_1$ on its own, as the Hartogs number of $\omega$, and leave $\mathbb{R}$ out of it.

A: Although, as Trevor wrote, you need the axiom of choice if you want to map the set $\omega_1$ of countable ordinals one-to-one into the reals, there are explicitly definable maps of the reals onto $\omega_1$, which might provide some intuition for why $\omega_1$ is "small".  Here's one such map.  First, map every non-negative integer (in $\mathbb R$) to itself (considered as an element of $\omega_1$); this is just to get the finite ordinals out of the way for the following construction. Next, let $C$ be the set of those reals in the interval $(0,1)$ whose decimal representation involves only the digits 5 and 6. (There's nothing special about 5 and 6, but I want to avoid 0 and 9 so that I needn't worry about a number having two decimal representations.) For any $x\in C$, consider the set $R_x$ of those ordered pairs $\langle m,n\rangle$ of natural numbers for which the $2^m3^n$-th digit in $x$ is 5. If $R_x$ happens to be a well-ordering of the set $\omega$ of all natural numbers, then map $x$ to the order-type of that well-ordering.  This ensures that the map will map onto all countable ordinals.  Finally, for those real numbers that I haven't yet mapped anywhere (because they're not natural numbers and either they're not in $C$ or the associated $R_x$ isn't a well-ordering of $\omega$), map them to any countable ordinal you like, say 0.

A: The set of countable ordinals as as least uncountable as can be. It is exactly the ordinal $\omega_1$ and has size $\aleph_1$. The real numbers, on the other hand, are provably uncountable, but can have an arbitrarily large cardinality. So it would be at least of size $\aleph_1$ (in $\sf ZFC$, anyway).
As for the term "see", if the above explanation is not sufficient and you are looking for a geometric visualization then you're asking for trouble. While we can easily understand the real numbers as a "line" the ordinals are more difficult because they have limit points, but $\omega_1$ has so many limit points that just drawing the limit points, or the limit of limit points, or the limit of limit of limit points, and so on, all that would amount to the same drawing.
So it becomes hard to visualize $\omega_1$, and these visualizations never help us understand the cardinality of anything anyway. But wait, it gets worse. 
Given $M$ a [countable] transitive model of set theory, and $\alpha$ is an uncountable ordinal in $M$, there is a generic extension of $M$ where $\alpha$ is in fact countable internally. The fact it is a generic extension tells us that there are no new ordinals, so without adding new ordinals we made the ordinal countable.
So it's hard to get an accurate image of $\omega_1$. My rule of thumb is that whatever you think it is, it's larger, much larger. But still quite small -- being the least uncountable ordinal. And $\Bbb R$ is at least as big.
