how is hmm used what is the difference between sequence alignment and hmm? which models are needed to generate an hemm? where is the hidden markov model used? how to generate hmm how is an hmm generated how do you generate an hmm hmms definition in sequence alignment how is an hmm produced in a sequence alignment why do hmm's generate sequence alignment what is the purpose of an hmm in na sequence alignment why is the hmm generated why is hmm useful for alignment why do hmms in sequence alignments when is hmm generated how do you create hmms how are sequence alignments created why do hmms need to be generated why is hmm used in protein alignment why use hmm