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Text: Raw data that support the findings of this study have been deposited in the NCBI Sequence Read Archive (SRA); accession numbers: SRP065884 for RNAseq analyses; SRP078907, SRS1569653, SRX1959559, SRR3929906, SRS1569655, SRX1959557, SRR3929907, SRS1569656, SRX1959558, SRR3929908, SRS1569657, SRX1959554, SRR3929909, SRS1569658, SRX1959555, SRR3929910, SRS1569671, SRX1959540, SRR3929923, SRS1569672, SRX1959541, SRR3929924, SRS1569676, SRX1959574, SRR3929927, SRS1569677, SRX1959575, SRR3929928, SRS1569678, SRX1959576, SRR3929929, SRS1569679, SRX1959572, SRR3929930, SRS1569680, SRX1959573, SRR3929931, SRS1569681, SRX1959571, SRR3929932, SRS1569682, SRX1959570, SRR3929933, SRS1569683, SRX1959569, SRR3929934, SRS1569684, SRX1959567, SRR3929935, SRS1569686, SRX1959564, SRR3929936, SRS1569687, SRX1959565, SRR3929937, SRS1569688, SRX1959566, SRR3929938, SRS1569689, SRX1959561, SRR3929939, SRS1569690, SRX1959562, SRR3929940 for BSseq analyses.
Full annotations and results from statistical analyses are provided in supplementary Table 3 (RNAseq), supplementary Table 4 (Capture-BSseq) and supplementary Table 7 (whole genome BSseq).
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