  Mandarin Chinese is characterized by being a tonal language; the pitch (or
$F_0$) of its utterances carries considerable linguistic information. However,
speech samples from different individuals are subject to changes in amplitude
and phase which must be accounted for in any analysis which attempts to provide
a linguistically meaningful description of the language. A joint model for
amplitude, phase and duration is presented which combines elements from
Functional Data Analysis, Compositional Data Analysis and Linear Mixed Effects
Models. By decomposing functions via a functional principal component analysis,
and connecting registration functions to compositional data analysis, a joint
multivariate mixed effect model can be formulated which gives insights into the
relationship between the different modes of variation as well as their
dependence on linguistic and non-linguistic covariates. The model is applied to
the COSPRO-1 data set, a comprehensive database of spoken Taiwanese Mandarin,
containing approximately 50 thousand phonetically diverse sample $F_0$ contours
(syllables), and reveals that phonetic information is jointly carried by both
amplitude and phase variation.
