  The theoretical uncertainty in the nuclear Schiff moment is an obstacle to
set constraints on $ CP $ violation beyond the standard model from experimental
upper bounds on atomic electric dipole moments. We perform large-scale
shell-model calculations of the $^{129}$Xe and $^{199}$Hg nuclei with realistic
effective interactions. To estimate the Schiff moments caused by the $ P $, $ T
$-odd $ \pi NN $ interaction perturbatively, we employ the one-particle
one-hole approximation to the intermediate states. The Schiff moments of
$^{129}$Xe and $^{199}$Hg are reduced due to the configuration mixing by $ \sim
10 \% $ from the evaluation of the independent particle model. On the other
hand, the reduction is more significant in mean-field based calculations and
shell-model calculations with a drastic truncation. In order to resolve the
discrepancy in the Schiff moment of $^{199}$Hg among several nuclear models, we
survey low-energy nuclear structure. The large-scale shell-model calculations
reveal that the Schiff moment of $^{199}$Hg is considerably quenched in the
second $ \frac{ 1 }{ 2 }^- $ state.
