  Scanning $\mu$SQUID force microscopy is used to study magnetic flux
structures in single crystals of the layered spin triplet superconductor
Sr$\_{2}$RuO$\_{4}$. Images of the magnetic flux configuration above the
$\vec{a}\vec{b}$-face of the cleaved crystal are acquired, mostly after
field-cooling the sample. For low applied magnetic fields, individual vortices
are observed, each carrying a single quantum of flux. Above 1 gauss,
coalescence of vortices is discovered. The coalescing vortices may indicate the
presence of domains of a chiral order parameter. When the applied field is
tilted from the $\vec{c}$-axis, we observe a gradual transition from vortex
domains to vortex chains. The in-plane component of the applied magnetic field
transforms the vortex domains to vortex chains by aligning them along the field
direction.This behavior and the inter-chain distance varies in qualitative
agreement with the Ginzburg Landau theory of anisotropic 3D superconductors.
The effective mass anisotropy of Sr$\_{2}$RuO$\_{4}$, $\gamma$=20, is the
highest observed in three dimensional superconductors. When the applied field
is closely in plane, the vortex form flux channels confined between the
crystal-layers. Residual Abrikosov vortices are pinned preferentially on these
channels. Thus the in-plane vortices are decorated by crossing Abrikosov
vortices: two vortex orientations are apparent simultaneously, one along the
layers and the other perpendicular to the layers.
