  Hidden variables are ubiquitous in practical data analysis, and therefore
modeling marginal densities and doing inference with the resulting models is an
important problem in statistics, machine learning, and causal inference.
Recently, a new type of graphical model, called the nested Markov model, was
developed which captures equality constraints found in marginals of directed
acyclic graph (DAG) models. Some of these constraints, such as the so called
`Verma constraint', strictly generalize conditional independence. To make
modeling and inference with nested Markov models practical, it is necessary to
limit the number of parameters in the model, while still correctly capturing
the constraints in the marginal of a DAG model. Placing such limits is similar
in spirit to sparsity methods for undirected graphical models, and regression
models. In this paper, we give a log-linear parameterization which allows
sparse modeling with nested Markov models. We illustrate the advantages of this
parameterization with a simulation study.
