  This report reviews the study of open heavy-flavour and quarkonium production
in high-energy hadronic collisions, as tools to investigate fundamental aspects
of Quantum Chromodynamics, from the proton and nucleus structure at high energy
to deconfinement and the properties of the Quark-Gluon Plasma. Emphasis is
given to the lessons learnt from LHC Run 1 results, which are reviewed in a
global picture with the results from SPS and RHIC at lower energies, as well as
to the questions to be addressed in the future. The report covers heavy flavour
and quarkonium production in proton-proton, proton-nucleus and nucleus-nucleus
collisions. This includes discussion of the effects of hot and cold strongly
interacting matter, quarkonium photo-production in nucleus-nucleus collisions
and perspectives on the study of heavy flavour and quarkonium with upgrades of
existing experiments and new experiments. The report results from the activity
of the SaporeGravis network of the I3 Hadron Physics programme of the European
Union 7th Framework Programme.
