  Protein Contact Network (PCN) is a powerful tool for analysing the structure
and function of proteins. In particular, PCN has been used for disclosing the
molecular features of allosteric regulation through PCN clustering. Such
analysis is relevant in many applications, such as the recent study of
SARS-CoV-2 Spike Protein. Despite its relevance, methods for the analysis of
PCN are spread into a set of different libraries and tools. Therefore, the
introduction of a tool that incorporates all the function may help researchers.
We present PCN-Miner a software tool implemented in the Python programming
language able to import protein in the Protein Data Bank format and generate
the corresponding protein contact network. Then it offers a set of algorithms
for the analysis of PCS that cover a large set of applications: from clustering
to embedding and subsequent analysis. Software is available at
\url{https://github.com/hguzzi/ProteinContactNetworks}
