derek-thomas
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Commit
·
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Parent(s):
1a53147
Init commit
Browse files- app.py +59 -0
- media/automatic-embeddings-cost.png +0 -0
- notebooks/automated_embeddings.ipynb +0 -749
- requirements.txt +1 -1
- src/my_logger.py +22 -0
- src/utilities.py +62 -0
- src/visualize_logs.py +46 -0
app.py
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import os
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from pathlib import Path
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import gradio as gr
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from huggingface_hub import WebhookPayload, WebhooksServer
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from src.utilities import load_datasets, merge_and_update_datasets
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from src.my_logger import setup_logger
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from src.visualize_logs import log_file_to_html_string
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proj_dir = Path(__name__).parent
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logger = setup_logger(__name__)
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SUBREDDIT = os.environ["SUBREDDIT"]
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USERNAME = os.environ["USERNAME"]
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OG_DATASET= f"{USERNAME}/dataset-creator-reddit-{SUBREDDIT}"
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PROCESSED_DATASET = os.environ['PROCESSED_DATASET']
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HUGGINGFACE_AUTH_TOKEN = os.environ["HUGGINGFACE_AUTH_TOKEN"]
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WEBHOOK_SECRET = os.getenv("HF_WEBHOOK_SECRET", 'secret')
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intro_md = """
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# Processing BORU
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This space is triggered by a webhook for changes on
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[derek-thomas/dataset-creator-reddit-bestofredditorupdates](https://huggingface.co/datasets/derek-thomas/dataset-creator-reddit-bestofredditorupdates).
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It then takes the updates from that dataset and get embeddings and puts the results in
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[https://huggingface.co/datasets/derek-thomas/reddit-bestofredditorupdates-processed](https://huggingface.co/datasets/derek-thomas/reddit-bestofredditorupdates-processed)
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"""
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with gr.Blocks() as ui:
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with gr.Tab("Application"):
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gr.Markdown(intro_md)
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output = gr.HTML(log_file_to_html_string, every=1)
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app = WebhooksServer(ui=ui.queue(), webhook_secret=WEBHOOK_SECRET)
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@app.add_webhook("/dataset_repo")
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async def community(payload: WebhookPayload):
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if payload.event.scope.startswith("repo"):
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logger.info(f"Webhook received from {payload.repo.name} indicating a repo {payload.event.action}")
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else:
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return
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logger.info(f"Loading new dataset...")
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dataset, original_dataset = load_datasets()
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logger.info(f"Loaded new dataset")
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logger.info(f"Merging and Updating row...")
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dataset = merge_and_update_datasets(dataset, original_dataset)
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# Push the augmented dataset to the Hugging Face hub
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logger.debug(f"Pushing processed data to the Hugging Face Hub...")
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dataset.push_to_hub(PROCESSED_DATASET, token=HUGGINGFACE_AUTH_TOKEN)
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logger.info(f"Pushed processed data to the Hugging Face Hub")
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if __name__ == '__main__':
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app.launch(server_name="0.0.0.0", show_error=True, server_port=7860)
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# ui.queue().launch(server_name="0.0.0.0", show_error=True, server_port=7860)
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media/automatic-embeddings-cost.png
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notebooks/automated_embeddings.ipynb
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{
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"cells": [
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{
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"cell_type": "markdown",
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"id": "5d9aca72-957a-4ee2-862f-e011b9cd3a62",
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"metadata": {},
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"source": [
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"# Introduction\n",
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"## Goal\n",
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"I have a dataset I want to embed for semantic search (or QA, or RAG), I want the easiest way to do embed this and put it in a new dataset.\n",
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"\n",
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"## Approach\n",
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"Im using a dataset from my favorite subreddit [r/bestofredditorupdates](). Since it has such long entries, I will use the new [jinaai/jina-embeddings-v2-base-en](https://huggingface.co/jinaai/jina-embeddings-v2-base-en) since it has an 8k context length. Since Im GPU-poor I will deploy this using [Inference Endpoint](https://huggingface.co/inference-endpoints) to save money and time. To follow this you will need to add a payment method. To make it even easier, I'll make this fully API based."
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]
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},
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{
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"cell_type": "markdown",
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"id": "d2534669-003d-490c-9d7a-32607fa5f404",
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"metadata": {},
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"source": [
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"# Setup"
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]
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},
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{
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"cell_type": "markdown",
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"id": "3c830114-dd88-45a9-81b9-78b0e3da7384",
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"metadata": {},
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"source": [
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"## Requirements"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "35386f72-32cb-49fa-a108-3aa504e20429",
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"metadata": {},
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"outputs": [],
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"source": [
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"!pip install -q -r ../requirements.txt"
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]
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},
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{
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"cell_type": "markdown",
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"id": "b6f72042-173d-4a72-ade1-9304b43b528d",
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"metadata": {},
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"source": [
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"## Imports"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 1,
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"id": "e2beecdd-d033-4736-bd45-6754ec53b4ac",
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"metadata": {
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"tags": []
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},
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"outputs": [],
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"source": [
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"import asyncio\n",
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"from getpass import getpass\n",
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"import json\n",
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"from pathlib import Path\n",
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"import time\n",
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"\n",
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"from aiohttp import ClientSession, ClientTimeout\n",
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"from datasets import load_dataset, Dataset, DatasetDict\n",
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"from huggingface_hub import notebook_login\n",
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"import pandas as pd\n",
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"import requests\n",
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"from tqdm.auto import tqdm"
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]
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},
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{
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"cell_type": "markdown",
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"id": "5eece903-64ce-435d-a2fd-096c0ff650bf",
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"metadata": {},
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"source": [
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"## Config\n",
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"You need to fill this in with your desired repos. Note I used 5 for the `MAX_WORKERS` since `jina-embeddings-v2` are quite memory hungry. "
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]
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},
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{
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"cell_type": "code",
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"execution_count": 2,
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"id": "dcd7daed-6aca-4fe7-85ce-534bdcd8bc87",
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"metadata": {
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"tags": []
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},
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"outputs": [],
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"source": [
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"dataset_in = 'derek-thomas/dataset-creator-reddit-bestofredditorupdates'\n",
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"dataset_out = \"processed-bestofredditorupdates\"\n",
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"endpoint_name = \"boru-jina-embeddings-demo\"\n",
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"\n",
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"MAX_WORKERS = 5 "
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]
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},
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{
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"cell_type": "code",
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"execution_count": 3,
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"id": "88cdbd73-5923-4ae9-9940-b6be935f70fa",
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"metadata": {
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"tags": []
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},
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"outputs": [
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{
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"name": "stdin",
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"output_type": "stream",
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"text": [
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"What is your Hugging Face 🤗 username? (with a credit card) ········\n",
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"What is your Hugging Face 🤗 token? ········\n"
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]
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}
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],
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"source": [
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"username = getpass(prompt=\"What is your Hugging Face 🤗 username? (with an added payment method)\")\n",
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"hf_token = getpass(prompt='What is your Hugging Face 🤗 token?')"
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]
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},
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{
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"cell_type": "markdown",
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"id": "b972a719-2aed-4d2e-a24f-fae7776d5fa4",
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"metadata": {},
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"source": [
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"## Get Dataset"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 4,
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"id": "27835fa4-3a4f-44b1-a02a-5e31584a1bba",
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"metadata": {
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"tags": []
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"Dataset({\n",
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" features: ['date_utc', 'title', 'flair', 'content', 'poster', 'permalink', 'id', 'content_length', 'score'],\n",
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" num_rows: 9991\n",
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"})"
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]
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},
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"execution_count": 4,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"dataset = load_dataset(dataset_in, token=hf_token)\n",
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"dataset['train']"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 5,
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"id": "8846087e-4d0d-4c0e-8aeb-ea95d9e97126",
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"metadata": {
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"tags": []
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"(9991,\n",
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" {'date_utc': Timestamp('2022-12-31 18:16:22'),\n",
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" 'title': 'To All BORU contributors, Thank you :)',\n",
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" 'flair': 'CONCLUDED',\n",
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" 'content': '[removed]',\n",
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" 'poster': 'IsItAcOnSeQuEnCe',\n",
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" 'permalink': '/r/BestofRedditorUpdates/comments/10004zw/to_all_boru_contributors_thank_you/',\n",
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" 'id': '10004zw',\n",
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" 'content_length': 9,\n",
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" 'score': 1})"
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]
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},
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"execution_count": 5,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"documents = dataset['train'].to_pandas().to_dict('records')\n",
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"len(documents), documents[0]"
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]
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},
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{
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"cell_type": "markdown",
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"id": "93096cbc-81c6-4137-a283-6afb0f48fbb9",
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"metadata": {},
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"source": [
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"# Inference Endpoints\n",
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"## Create Inference Endpoint\n",
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"We are going to use the [API](https://huggingface.co/docs/inference-endpoints/api_reference) to create an [Inference Endpoint](https://huggingface.co/inference-endpoints). This should provide a few main benefits:\n",
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"- It's convenient (No clicking)\n",
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"- It's repeatable (We have the code to run it easily)\n",
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"- It's cheaper (No time spent waiting for it to load, and automatically shut it down)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 6,
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"id": "3a8f67b9-6ac6-4b5e-91ee-e48463191e1b",
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"metadata": {
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"tags": []
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},
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"outputs": [],
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"source": [
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"headers = {\n",
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"\t\"Authorization\": f\"Bearer {hf_token}\",\n",
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"\t\"Content-Type\": \"application/json\"\n",
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"}\n",
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"base_url = f\"https://api.endpoints.huggingface.cloud/v2/endpoint/{username}\"\n",
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"endpoint_url = f\"https://api.endpoints.huggingface.cloud/v2/endpoint/{username}/{endpoint_name}\""
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]
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},
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{
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"cell_type": "markdown",
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"id": "0f2c97dc-34e8-49e9-b60e-f5b7366294c0",
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"metadata": {},
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"source": [
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"There are a few design choices here:\n",
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"- I'm using the `g5.2xlarge` since it is big and `jina-embeddings-v2` are memory hungry (remember the 8k context length). \n",
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"- I didnt alter the default `MAX_BATCH_TOKENS` or `MAX_CONCURRENT_REQUESTS`\n",
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" - You should consider this if you are making this production ready\n",
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" - You will need to restrict these to match the HW you are running on\n",
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"- As mentioned before, I chose the repo and the corresponding revision\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 7,
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"id": "f1ea29cb-b69d-4340-859f-3646d650c68e",
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"metadata": {
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"tags": []
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},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"202\n"
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]
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}
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],
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"source": [
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"data = {\n",
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" \"accountId\": None,\n",
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" \"compute\": {\n",
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" \"accelerator\": \"gpu\",\n",
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" \"instanceType\": \"g5.2xlarge\",\n",
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" \"instanceSize\": \"medium\",\n",
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" \"scaling\": {\n",
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" \"maxReplica\": 1,\n",
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" \"minReplica\": 1\n",
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" }\n",
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" },\n",
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" \"model\": {\n",
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" \"framework\": \"pytorch\",\n",
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" \"image\": {\n",
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" \"custom\": {\n",
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" \"url\": \"ghcr.io/huggingface/text-embeddings-inference:0.3.0\",\n",
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" \"health_route\": \"/health\",\n",
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" \"env\": {\n",
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" \"MAX_BATCH_TOKENS\": \"16384\",\n",
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" \"MAX_CONCURRENT_REQUESTS\": \"512\",\n",
|
| 268 |
-
" \"MODEL_ID\": \"/repository\"\n",
|
| 269 |
-
" }\n",
|
| 270 |
-
" }\n",
|
| 271 |
-
" },\n",
|
| 272 |
-
" \"repository\": \"jinaai/jina-embeddings-v2-base-en\",\n",
|
| 273 |
-
" \"revision\": \"8705ed9657208b2d5220fffad1c3a30980d279d0\",\n",
|
| 274 |
-
" \"task\": \"sentence-embeddings\",\n",
|
| 275 |
-
" },\n",
|
| 276 |
-
" \"name\": endpoint_name,\n",
|
| 277 |
-
" \"provider\": {\n",
|
| 278 |
-
" \"region\": \"us-east-1\",\n",
|
| 279 |
-
" \"vendor\": \"aws\"\n",
|
| 280 |
-
" },\n",
|
| 281 |
-
" \"type\": \"protected\"\n",
|
| 282 |
-
"}\n",
|
| 283 |
-
"\n",
|
| 284 |
-
"response = requests.post(base_url, headers={**headers, 'accept': 'application/json'}, json=data)\n",
|
| 285 |
-
"\n",
|
| 286 |
-
"\n",
|
| 287 |
-
"print(response.status_code)"
|
| 288 |
-
]
|
| 289 |
-
},
|
| 290 |
-
{
|
| 291 |
-
"cell_type": "markdown",
|
| 292 |
-
"id": "96d173b2-8980-4554-9039-c62843d3fc7d",
|
| 293 |
-
"metadata": {},
|
| 294 |
-
"source": [
|
| 295 |
-
"## Wait until its running\n",
|
| 296 |
-
"Here we use `tqdm` as a pretty way of displaying our status. It took about ~30s for this model to get the Inference Endpoint running."
|
| 297 |
-
]
|
| 298 |
-
},
|
| 299 |
-
{
|
| 300 |
-
"cell_type": "code",
|
| 301 |
-
"execution_count": 8,
|
| 302 |
-
"id": "b8aa66a9-3c8a-4040-9465-382c744f36cf",
|
| 303 |
-
"metadata": {
|
| 304 |
-
"tags": []
|
| 305 |
-
},
|
| 306 |
-
"outputs": [
|
| 307 |
-
{
|
| 308 |
-
"data": {
|
| 309 |
-
"application/vnd.jupyter.widget-view+json": {
|
| 310 |
-
"model_id": "a6f27d86f68b4000aa40e09ae079c6b0",
|
| 311 |
-
"version_major": 2,
|
| 312 |
-
"version_minor": 0
|
| 313 |
-
},
|
| 314 |
-
"text/plain": [
|
| 315 |
-
"Waiting for status to change: 0s [00:00, ?s/s]"
|
| 316 |
-
]
|
| 317 |
-
},
|
| 318 |
-
"metadata": {},
|
| 319 |
-
"output_type": "display_data"
|
| 320 |
-
},
|
| 321 |
-
{
|
| 322 |
-
"name": "stdout",
|
| 323 |
-
"output_type": "stream",
|
| 324 |
-
"text": [
|
| 325 |
-
"Status is 'running'.\n"
|
| 326 |
-
]
|
| 327 |
-
}
|
| 328 |
-
],
|
| 329 |
-
"source": [
|
| 330 |
-
"with tqdm(desc=\"Waiting for status to change\", unit=\"s\") as pbar:\n",
|
| 331 |
-
" while True:\n",
|
| 332 |
-
" response_json = requests.get(endpoint_url, headers=headers).json()\n",
|
| 333 |
-
" current_status = response_json['status']['state']\n",
|
| 334 |
-
"\n",
|
| 335 |
-
" if current_status == 'running':\n",
|
| 336 |
-
" print(\"Status is 'running'.\")\n",
|
| 337 |
-
" break\n",
|
| 338 |
-
"\n",
|
| 339 |
-
" pbar.set_description(f\"Status: {current_status}\")\n",
|
| 340 |
-
" time.sleep(2)\n",
|
| 341 |
-
" pbar.update(1)\n",
|
| 342 |
-
"\n",
|
| 343 |
-
"embedding_url = response_json['status']['url']"
|
| 344 |
-
]
|
| 345 |
-
},
|
| 346 |
-
{
|
| 347 |
-
"cell_type": "markdown",
|
| 348 |
-
"id": "063fa066-e4d0-4a65-a82d-cf17db4af8d8",
|
| 349 |
-
"metadata": {},
|
| 350 |
-
"source": [
|
| 351 |
-
"I found that even though the status is running, I want to get a test message to run first before running our batch in parallel."
|
| 352 |
-
]
|
| 353 |
-
},
|
| 354 |
-
{
|
| 355 |
-
"cell_type": "code",
|
| 356 |
-
"execution_count": 9,
|
| 357 |
-
"id": "66e00960-1d3d-490d-bedc-3eaf1924db76",
|
| 358 |
-
"metadata": {},
|
| 359 |
-
"outputs": [
|
| 360 |
-
{
|
| 361 |
-
"data": {
|
| 362 |
-
"application/vnd.jupyter.widget-view+json": {
|
| 363 |
-
"model_id": "4e03e5a3d07a498ca6b3631605724b62",
|
| 364 |
-
"version_major": 2,
|
| 365 |
-
"version_minor": 0
|
| 366 |
-
},
|
| 367 |
-
"text/plain": [
|
| 368 |
-
"Waiting for endpoint to accept requests: 0s [00:00, ?s/s]"
|
| 369 |
-
]
|
| 370 |
-
},
|
| 371 |
-
"metadata": {},
|
| 372 |
-
"output_type": "display_data"
|
| 373 |
-
},
|
| 374 |
-
{
|
| 375 |
-
"name": "stdout",
|
| 376 |
-
"output_type": "stream",
|
| 377 |
-
"text": [
|
| 378 |
-
"Endpoint is accepting requests\n"
|
| 379 |
-
]
|
| 380 |
-
}
|
| 381 |
-
],
|
| 382 |
-
"source": [
|
| 383 |
-
"payload = {\"inputs\": \"This sound track was beautiful! It paints the senery in your mind so well I would recomend it even to people who hate vid. game music!\"}\n",
|
| 384 |
-
"\n",
|
| 385 |
-
"with tqdm(desc=\"Waiting for endpoint to accept requests\", unit=\"s\") as pbar:\n",
|
| 386 |
-
" while True:\n",
|
| 387 |
-
" try:\n",
|
| 388 |
-
" response_json = requests.post(embedding_url, headers=headers, json=payload).json()\n",
|
| 389 |
-
"\n",
|
| 390 |
-
" # Assuming the successful response has a specific structure\n",
|
| 391 |
-
" if len(response_json[0]) == 768:\n",
|
| 392 |
-
" print(\"Endpoint is accepting requests\")\n",
|
| 393 |
-
" break\n",
|
| 394 |
-
"\n",
|
| 395 |
-
" except requests.ConnectionError as e:\n",
|
| 396 |
-
" pass\n",
|
| 397 |
-
"\n",
|
| 398 |
-
" # Delay between retries\n",
|
| 399 |
-
" time.sleep(5)\n",
|
| 400 |
-
" pbar.update(1)\n"
|
| 401 |
-
]
|
| 402 |
-
},
|
| 403 |
-
{
|
| 404 |
-
"cell_type": "markdown",
|
| 405 |
-
"id": "f7186126-ef6a-47d0-b158-112810649cd9",
|
| 406 |
-
"metadata": {},
|
| 407 |
-
"source": [
|
| 408 |
-
"# Get Embeddings"
|
| 409 |
-
]
|
| 410 |
-
},
|
| 411 |
-
{
|
| 412 |
-
"cell_type": "markdown",
|
| 413 |
-
"id": "1dadfd68-6d46-4ce8-a165-bfeb43b1f114",
|
| 414 |
-
"metadata": {},
|
| 415 |
-
"source": [
|
| 416 |
-
"Here I send a document, update it with the embedding, and return it. This happens in parallel with `MAX_WORKERS`."
|
| 417 |
-
]
|
| 418 |
-
},
|
| 419 |
-
{
|
| 420 |
-
"cell_type": "code",
|
| 421 |
-
"execution_count": 10,
|
| 422 |
-
"id": "ad3193fb-3def-42a8-968e-c63f2b864ca8",
|
| 423 |
-
"metadata": {
|
| 424 |
-
"tags": []
|
| 425 |
-
},
|
| 426 |
-
"outputs": [],
|
| 427 |
-
"source": [
|
| 428 |
-
"async def request(document, semaphore):\n",
|
| 429 |
-
" # Semaphore guard\n",
|
| 430 |
-
" async with semaphore:\n",
|
| 431 |
-
" payload = {\n",
|
| 432 |
-
" \"inputs\": document['content'] or document['title'] or '[deleted]',\n",
|
| 433 |
-
" \"truncate\": True\n",
|
| 434 |
-
" }\n",
|
| 435 |
-
" \n",
|
| 436 |
-
" timeout = ClientTimeout(total=10) # Set a timeout for requests (10 seconds here)\n",
|
| 437 |
-
"\n",
|
| 438 |
-
" async with ClientSession(timeout=timeout, headers=headers) as session:\n",
|
| 439 |
-
" async with session.post(embedding_url, json=payload) as resp:\n",
|
| 440 |
-
" if resp.status != 200:\n",
|
| 441 |
-
" raise RuntimeError(await resp.text())\n",
|
| 442 |
-
" result = await resp.json()\n",
|
| 443 |
-
" \n",
|
| 444 |
-
" document['embedding'] = result[0] # Assuming the API's output can be directly assigned\n",
|
| 445 |
-
" return document\n",
|
| 446 |
-
"\n",
|
| 447 |
-
"async def main(documents):\n",
|
| 448 |
-
" # Semaphore to limit concurrent requests. Adjust the number as needed.\n",
|
| 449 |
-
" semaphore = asyncio.BoundedSemaphore(MAX_WORKERS)\n",
|
| 450 |
-
"\n",
|
| 451 |
-
" # Creating a list of tasks\n",
|
| 452 |
-
" tasks = [request(document, semaphore) for document in documents]\n",
|
| 453 |
-
" \n",
|
| 454 |
-
" # Using tqdm to show progress. It's been integrated into the async loop.\n",
|
| 455 |
-
" for f in tqdm(asyncio.as_completed(tasks), total=len(documents)):\n",
|
| 456 |
-
" await f"
|
| 457 |
-
]
|
| 458 |
-
},
|
| 459 |
-
{
|
| 460 |
-
"cell_type": "code",
|
| 461 |
-
"execution_count": 11,
|
| 462 |
-
"id": "ec4983af-65eb-4841-808a-3738fb4d682d",
|
| 463 |
-
"metadata": {
|
| 464 |
-
"tags": []
|
| 465 |
-
},
|
| 466 |
-
"outputs": [
|
| 467 |
-
{
|
| 468 |
-
"data": {
|
| 469 |
-
"application/vnd.jupyter.widget-view+json": {
|
| 470 |
-
"model_id": "cb73af52244e40d2aab8bdac3a55d443",
|
| 471 |
-
"version_major": 2,
|
| 472 |
-
"version_minor": 0
|
| 473 |
-
},
|
| 474 |
-
"text/plain": [
|
| 475 |
-
" 0%| | 0/9991 [00:00<?, ?it/s]"
|
| 476 |
-
]
|
| 477 |
-
},
|
| 478 |
-
"metadata": {},
|
| 479 |
-
"output_type": "display_data"
|
| 480 |
-
},
|
| 481 |
-
{
|
| 482 |
-
"name": "stdout",
|
| 483 |
-
"output_type": "stream",
|
| 484 |
-
"text": [
|
| 485 |
-
"Embeddings = 9991 documents = 9991\n",
|
| 486 |
-
"32 min 14.53 sec\n"
|
| 487 |
-
]
|
| 488 |
-
}
|
| 489 |
-
],
|
| 490 |
-
"source": [
|
| 491 |
-
"start = time.perf_counter()\n",
|
| 492 |
-
"\n",
|
| 493 |
-
"# Get embeddings\n",
|
| 494 |
-
"await main(documents)\n",
|
| 495 |
-
"\n",
|
| 496 |
-
"# Make sure we got it all\n",
|
| 497 |
-
"count = 0\n",
|
| 498 |
-
"for document in documents:\n",
|
| 499 |
-
" if document['embedding'] and len(document['embedding']) == 768:\n",
|
| 500 |
-
" count += 1\n",
|
| 501 |
-
"print(f'Embeddings = {count} documents = {len(documents)}')\n",
|
| 502 |
-
"\n",
|
| 503 |
-
" \n",
|
| 504 |
-
"# Print elapsed time\n",
|
| 505 |
-
"elapsed_time = time.perf_counter() - start\n",
|
| 506 |
-
"minutes, seconds = divmod(elapsed_time, 60)\n",
|
| 507 |
-
"print(f\"{int(minutes)} min {seconds:.2f} sec\")"
|
| 508 |
-
]
|
| 509 |
-
},
|
| 510 |
-
{
|
| 511 |
-
"cell_type": "markdown",
|
| 512 |
-
"id": "bab97c7b-7bac-4bf5-9752-b528294dadc7",
|
| 513 |
-
"metadata": {},
|
| 514 |
-
"source": [
|
| 515 |
-
"## Pause Inference Endpoint\n",
|
| 516 |
-
"Now that we have finished, lets pause the endpoint so we don't incur any extra charges, this will also allow us to analyze the cost."
|
| 517 |
-
]
|
| 518 |
-
},
|
| 519 |
-
{
|
| 520 |
-
"cell_type": "code",
|
| 521 |
-
"execution_count": 12,
|
| 522 |
-
"id": "540a0978-7670-4ce3-95c1-3823cc113b85",
|
| 523 |
-
"metadata": {
|
| 524 |
-
"tags": []
|
| 525 |
-
},
|
| 526 |
-
"outputs": [
|
| 527 |
-
{
|
| 528 |
-
"name": "stdout",
|
| 529 |
-
"output_type": "stream",
|
| 530 |
-
"text": [
|
| 531 |
-
"200\n",
|
| 532 |
-
"paused\n"
|
| 533 |
-
]
|
| 534 |
-
}
|
| 535 |
-
],
|
| 536 |
-
"source": [
|
| 537 |
-
"response = requests.post(endpoint_url + '/pause', headers=headers)\n",
|
| 538 |
-
"\n",
|
| 539 |
-
"print(response.status_code)\n",
|
| 540 |
-
"print(response.json()['status']['state'])"
|
| 541 |
-
]
|
| 542 |
-
},
|
| 543 |
-
{
|
| 544 |
-
"cell_type": "markdown",
|
| 545 |
-
"id": "45ad65b7-3da2-4113-9b95-8fb4e21ae793",
|
| 546 |
-
"metadata": {},
|
| 547 |
-
"source": [
|
| 548 |
-
"# Push updated dataset to Hub\n",
|
| 549 |
-
"We now have our documents updated with the embeddings we wanted. First we need to convert it back to a `Dataset` format. I find its easiest to go from list of dicts -> `pd.DataFrame` -> `Dataset`"
|
| 550 |
-
]
|
| 551 |
-
},
|
| 552 |
-
{
|
| 553 |
-
"cell_type": "code",
|
| 554 |
-
"execution_count": 13,
|
| 555 |
-
"id": "9bb993f8-d624-4192-9626-8e9ed9888a1b",
|
| 556 |
-
"metadata": {
|
| 557 |
-
"tags": []
|
| 558 |
-
},
|
| 559 |
-
"outputs": [],
|
| 560 |
-
"source": [
|
| 561 |
-
"df = pd.DataFrame(documents)\n",
|
| 562 |
-
"dd = DatasetDict({'train': Dataset.from_pandas(df)})"
|
| 563 |
-
]
|
| 564 |
-
},
|
| 565 |
-
{
|
| 566 |
-
"cell_type": "code",
|
| 567 |
-
"execution_count": 14,
|
| 568 |
-
"id": "f48e7c55-d5b7-4ed6-8516-272ae38716b1",
|
| 569 |
-
"metadata": {
|
| 570 |
-
"tags": []
|
| 571 |
-
},
|
| 572 |
-
"outputs": [
|
| 573 |
-
{
|
| 574 |
-
"data": {
|
| 575 |
-
"application/vnd.jupyter.widget-view+json": {
|
| 576 |
-
"model_id": "84a481e0cf74494cb2eb9d9857701212",
|
| 577 |
-
"version_major": 2,
|
| 578 |
-
"version_minor": 0
|
| 579 |
-
},
|
| 580 |
-
"text/plain": [
|
| 581 |
-
"Pushing dataset shards to the dataset hub: 0%| | 0/1 [00:00<?, ?it/s]"
|
| 582 |
-
]
|
| 583 |
-
},
|
| 584 |
-
"metadata": {},
|
| 585 |
-
"output_type": "display_data"
|
| 586 |
-
},
|
| 587 |
-
{
|
| 588 |
-
"data": {
|
| 589 |
-
"application/vnd.jupyter.widget-view+json": {
|
| 590 |
-
"model_id": "b8f128dfe7c546bcbc8f04817e3ca48c",
|
| 591 |
-
"version_major": 2,
|
| 592 |
-
"version_minor": 0
|
| 593 |
-
},
|
| 594 |
-
"text/plain": [
|
| 595 |
-
"Creating parquet from Arrow format: 0%| | 0/10 [00:00<?, ?ba/s]"
|
| 596 |
-
]
|
| 597 |
-
},
|
| 598 |
-
"metadata": {},
|
| 599 |
-
"output_type": "display_data"
|
| 600 |
-
},
|
| 601 |
-
{
|
| 602 |
-
"data": {
|
| 603 |
-
"application/vnd.jupyter.widget-view+json": {
|
| 604 |
-
"model_id": "2dcc1d54036a49f1a1346a6be64e765a",
|
| 605 |
-
"version_major": 2,
|
| 606 |
-
"version_minor": 0
|
| 607 |
-
},
|
| 608 |
-
"text/plain": [
|
| 609 |
-
"Upload 1 LFS files: 0%| | 0/1 [00:00<?, ?it/s]"
|
| 610 |
-
]
|
| 611 |
-
},
|
| 612 |
-
"metadata": {},
|
| 613 |
-
"output_type": "display_data"
|
| 614 |
-
}
|
| 615 |
-
],
|
| 616 |
-
"source": [
|
| 617 |
-
"dd.push_to_hub(dataset_out, token=hf_token)"
|
| 618 |
-
]
|
| 619 |
-
},
|
| 620 |
-
{
|
| 621 |
-
"cell_type": "markdown",
|
| 622 |
-
"id": "41abea64-379d-49de-8d9a-355c2f4ce1ac",
|
| 623 |
-
"metadata": {},
|
| 624 |
-
"source": [
|
| 625 |
-
"# Analyze Usage\n",
|
| 626 |
-
"1. Go to your `dashboard_url` printed below\n",
|
| 627 |
-
"1. Click on the Usage & Cost tab\n",
|
| 628 |
-
"1. See how much you have spent"
|
| 629 |
-
]
|
| 630 |
-
},
|
| 631 |
-
{
|
| 632 |
-
"cell_type": "code",
|
| 633 |
-
"execution_count": 15,
|
| 634 |
-
"id": "16815445-3079-43da-b14e-b54176a07a62",
|
| 635 |
-
"metadata": {},
|
| 636 |
-
"outputs": [
|
| 637 |
-
{
|
| 638 |
-
"name": "stdout",
|
| 639 |
-
"output_type": "stream",
|
| 640 |
-
"text": [
|
| 641 |
-
"https://ui.endpoints.huggingface.co/HF-test-lab/endpoints/boru-jina-embeddings-demo\n"
|
| 642 |
-
]
|
| 643 |
-
}
|
| 644 |
-
],
|
| 645 |
-
"source": [
|
| 646 |
-
"dashboard_url = f'https://ui.endpoints.huggingface.co/{username}/endpoints/{endpoint_name}'\n",
|
| 647 |
-
"print(dashboard_url)"
|
| 648 |
-
]
|
| 649 |
-
},
|
| 650 |
-
{
|
| 651 |
-
"cell_type": "code",
|
| 652 |
-
"execution_count": 16,
|
| 653 |
-
"id": "81096c6f-d12f-4781-84ec-9066cfa465b3",
|
| 654 |
-
"metadata": {},
|
| 655 |
-
"outputs": [
|
| 656 |
-
{
|
| 657 |
-
"name": "stdin",
|
| 658 |
-
"output_type": "stream",
|
| 659 |
-
"text": [
|
| 660 |
-
"Hit enter to continue with the notebook \n"
|
| 661 |
-
]
|
| 662 |
-
},
|
| 663 |
-
{
|
| 664 |
-
"data": {
|
| 665 |
-
"text/plain": [
|
| 666 |
-
"''"
|
| 667 |
-
]
|
| 668 |
-
},
|
| 669 |
-
"execution_count": 16,
|
| 670 |
-
"metadata": {},
|
| 671 |
-
"output_type": "execute_result"
|
| 672 |
-
}
|
| 673 |
-
],
|
| 674 |
-
"source": [
|
| 675 |
-
"input(\"Hit enter to continue with the notebook\")"
|
| 676 |
-
]
|
| 677 |
-
},
|
| 678 |
-
{
|
| 679 |
-
"cell_type": "markdown",
|
| 680 |
-
"id": "847d524e-9aa6-4a6f-a275-8a552e289818",
|
| 681 |
-
"metadata": {},
|
| 682 |
-
"source": [
|
| 683 |
-
"We can see that it only took `$0.71` to pay for this!\n",
|
| 684 |
-
"\n",
|
| 685 |
-
""
|
| 686 |
-
]
|
| 687 |
-
},
|
| 688 |
-
{
|
| 689 |
-
"cell_type": "markdown",
|
| 690 |
-
"id": "b953d5be-2494-4ff8-be42-9daf00c99c41",
|
| 691 |
-
"metadata": {},
|
| 692 |
-
"source": [
|
| 693 |
-
"# Delete Endpoint\n",
|
| 694 |
-
"We should see a `200` if everything went correctly."
|
| 695 |
-
]
|
| 696 |
-
},
|
| 697 |
-
{
|
| 698 |
-
"cell_type": "code",
|
| 699 |
-
"execution_count": 17,
|
| 700 |
-
"id": "c310c0f3-6f12-4d5c-838b-3a4c1f2e54ad",
|
| 701 |
-
"metadata": {
|
| 702 |
-
"tags": []
|
| 703 |
-
},
|
| 704 |
-
"outputs": [
|
| 705 |
-
{
|
| 706 |
-
"name": "stdout",
|
| 707 |
-
"output_type": "stream",
|
| 708 |
-
"text": [
|
| 709 |
-
"200\n"
|
| 710 |
-
]
|
| 711 |
-
}
|
| 712 |
-
],
|
| 713 |
-
"source": [
|
| 714 |
-
"response = requests.delete(endpoint_url, headers=headers)\n",
|
| 715 |
-
"\n",
|
| 716 |
-
"print(response.status_code)"
|
| 717 |
-
]
|
| 718 |
-
},
|
| 719 |
-
{
|
| 720 |
-
"cell_type": "code",
|
| 721 |
-
"execution_count": null,
|
| 722 |
-
"id": "5db1b1c3-16c3-403a-9472-a97e730826d5",
|
| 723 |
-
"metadata": {},
|
| 724 |
-
"outputs": [],
|
| 725 |
-
"source": []
|
| 726 |
-
}
|
| 727 |
-
],
|
| 728 |
-
"metadata": {
|
| 729 |
-
"kernelspec": {
|
| 730 |
-
"display_name": "Python 3 (ipykernel)",
|
| 731 |
-
"language": "python",
|
| 732 |
-
"name": "python3"
|
| 733 |
-
},
|
| 734 |
-
"language_info": {
|
| 735 |
-
"codemirror_mode": {
|
| 736 |
-
"name": "ipython",
|
| 737 |
-
"version": 3
|
| 738 |
-
},
|
| 739 |
-
"file_extension": ".py",
|
| 740 |
-
"mimetype": "text/x-python",
|
| 741 |
-
"name": "python",
|
| 742 |
-
"nbconvert_exporter": "python",
|
| 743 |
-
"pygments_lexer": "ipython3",
|
| 744 |
-
"version": "3.10.8"
|
| 745 |
-
}
|
| 746 |
-
},
|
| 747 |
-
"nbformat": 4,
|
| 748 |
-
"nbformat_minor": 5
|
| 749 |
-
}
|
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|
requirements.txt
CHANGED
|
@@ -1,6 +1,6 @@
|
|
| 1 |
aiohttp==3.8.3
|
| 2 |
datasets==2.14.6
|
| 3 |
-
huggingface-hub==0.
|
| 4 |
pandas==1.5.3
|
| 5 |
requests==2.31.0
|
| 6 |
tqdm==4.66.1
|
|
|
|
| 1 |
aiohttp==3.8.3
|
| 2 |
datasets==2.14.6
|
| 3 |
+
huggingface-hub==0.19.4
|
| 4 |
pandas==1.5.3
|
| 5 |
requests==2.31.0
|
| 6 |
tqdm==4.66.1
|
src/my_logger.py
ADDED
|
@@ -0,0 +1,22 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
import logging
|
| 2 |
+
|
| 3 |
+
|
| 4 |
+
def setup_logger(name: str):
|
| 5 |
+
logger = logging.getLogger(name)
|
| 6 |
+
logger.setLevel(logging.DEBUG)
|
| 7 |
+
|
| 8 |
+
formatter = logging.Formatter('%(asctime)s - %(name)s - %(levelname)s - %(message)s')
|
| 9 |
+
|
| 10 |
+
# Create a file handler to write logs to a file
|
| 11 |
+
file_handler = logging.FileHandler('mylog.log')
|
| 12 |
+
file_handler.setLevel(logging.DEBUG)
|
| 13 |
+
file_handler.setFormatter(formatter)
|
| 14 |
+
logger.addHandler(file_handler)
|
| 15 |
+
|
| 16 |
+
# Create a stream handler to write logs to the console
|
| 17 |
+
stream_handler = logging.StreamHandler()
|
| 18 |
+
stream_handler.setLevel(logging.DEBUG)
|
| 19 |
+
stream_handler.setFormatter(formatter)
|
| 20 |
+
logger.addHandler(stream_handler)
|
| 21 |
+
|
| 22 |
+
return logger
|
src/utilities.py
ADDED
|
@@ -0,0 +1,62 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
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|
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|
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|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import os
|
| 2 |
+
|
| 3 |
+
import numpy as np
|
| 4 |
+
import pandas as pd
|
| 5 |
+
from datasets import Dataset, DownloadMode, load_dataset
|
| 6 |
+
from gradio_client import Client
|
| 7 |
+
|
| 8 |
+
from src.my_logger import setup_logger
|
| 9 |
+
|
| 10 |
+
SUBREDDIT = os.environ["SUBREDDIT"]
|
| 11 |
+
USERNAME = os.environ["USERNAME"]
|
| 12 |
+
OG_DATASET= f"{USERNAME}/dataset-creator-reddit-{SUBREDDIT}"
|
| 13 |
+
PROCESSED_DATASET= os.environ['PROCESSED_DATASET']
|
| 14 |
+
|
| 15 |
+
client = Client("derek-thomas/nomic-embeddings")
|
| 16 |
+
logger = setup_logger(__name__)
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
async def load_datasets():
|
| 20 |
+
# Get latest datasets locally
|
| 21 |
+
logger.debug(f"Trying to download {PROCESSED_DATASET}")
|
| 22 |
+
dataset = load_dataset(PROCESSED_DATASET, download_mode=DownloadMode.FORCE_REDOWNLOAD)
|
| 23 |
+
logger.debug(f"Loaded {PROCESSED_DATASET}")
|
| 24 |
+
|
| 25 |
+
logger.debug(f"Trying to download {OG_DATASET}")
|
| 26 |
+
original_dataset = load_dataset(OG_DATASET, download_mode=DownloadMode.FORCE_REDOWNLOAD)
|
| 27 |
+
logger.debug(f"Loaded {OG_DATASET}")
|
| 28 |
+
return dataset, original_dataset
|
| 29 |
+
|
| 30 |
+
|
| 31 |
+
def merge_and_update_datasets(dataset, original_dataset):
|
| 32 |
+
# Merge and figure out which rows need to be updated with embeddings
|
| 33 |
+
odf = original_dataset['train'].to_pandas()
|
| 34 |
+
df = dataset['train'].to_pandas()
|
| 35 |
+
|
| 36 |
+
# Step 1: Merge df onto odf
|
| 37 |
+
# We'll bring in 'content' and 'embedding' from df to compare and possibly update 'embedding'
|
| 38 |
+
merged_df = pd.merge(odf, df[['id', 'content', 'embedding']], on='id', how='left', suffixes=('_odf', ''))
|
| 39 |
+
updated_rows = len(merged_df[merged_df.content != merged_df.content_odf])
|
| 40 |
+
|
| 41 |
+
# Step 2: Compare 'content' from odf and df, update 'embedding' if they differ
|
| 42 |
+
merged_df['embedding'] = np.where(merged_df['content_odf'] != merged_df['content'], None, merged_df['embedding'])
|
| 43 |
+
|
| 44 |
+
# Step 3: Cleanup - keep only the necessary columns.
|
| 45 |
+
# Assuming you want to keep 'content' from 'odf' and the updated 'embedding', and drop the rest
|
| 46 |
+
merged_df = merged_df.drop(columns=['content', 'new', 'updated']) # Update columns to match df
|
| 47 |
+
merged_df.rename(columns={'content_odf': 'content'}, inplace=True) # Rename 'content_odf' back to 'content'
|
| 48 |
+
|
| 49 |
+
logger.info(f"Updating {updated_rows} rows...")
|
| 50 |
+
# Iterate over the DataFrame rows where 'embedding' is None
|
| 51 |
+
for index, row in merged_df[merged_df['embedding'].isnull()].iterrows():
|
| 52 |
+
# Update 'embedding' for the current row using our function
|
| 53 |
+
merged_df.at[index, 'embedding'] = update_embeddings(row['content'])
|
| 54 |
+
|
| 55 |
+
dataset['train'] = Dataset.from_pandas(merged_df)
|
| 56 |
+
logger.info(f"Updated {updated_rows} rows")
|
| 57 |
+
return dataset
|
| 58 |
+
|
| 59 |
+
|
| 60 |
+
def update_embeddings(content):
|
| 61 |
+
embedding = client.predict(content, api_name="/embed")
|
| 62 |
+
return np.array(embedding)
|
src/visualize_logs.py
ADDED
|
@@ -0,0 +1,46 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from bs4 import BeautifulSoup
|
| 2 |
+
from rich.console import Console
|
| 3 |
+
from rich.syntax import Syntax
|
| 4 |
+
|
| 5 |
+
|
| 6 |
+
def log_file_to_html_string():
|
| 7 |
+
log_file = "mylog.log"
|
| 8 |
+
num_lines_visualize = 50
|
| 9 |
+
|
| 10 |
+
console = Console(record=True, width=150, style="#272822")
|
| 11 |
+
with open(log_file, "rt") as f:
|
| 12 |
+
# Seek to the end of the file minus 300 lines
|
| 13 |
+
# Read the last 300 lines of the file
|
| 14 |
+
lines = f.readlines()
|
| 15 |
+
lines = lines[-num_lines_visualize:]
|
| 16 |
+
|
| 17 |
+
# Syntax-highlight the last 300 lines of the file using the Python lexer and Monokai style
|
| 18 |
+
output = "".join(lines)
|
| 19 |
+
syntax = Syntax(output, "python", theme="monokai", word_wrap=True)
|
| 20 |
+
|
| 21 |
+
console.print(syntax);
|
| 22 |
+
html_content = console.export_html(inline_styles=True)
|
| 23 |
+
|
| 24 |
+
# Parse the HTML content using BeautifulSoup
|
| 25 |
+
soup = BeautifulSoup(html_content, 'lxml')
|
| 26 |
+
|
| 27 |
+
# Modify the <pre> tag
|
| 28 |
+
pre_tag = soup.pre
|
| 29 |
+
pre_tag['class'] = 'scrollable'
|
| 30 |
+
del pre_tag['style']
|
| 31 |
+
|
| 32 |
+
# Add your custom styles and the .scrollable CSS to the <style> tag
|
| 33 |
+
style_tag = soup.style
|
| 34 |
+
style_content = """
|
| 35 |
+
pre, code {
|
| 36 |
+
background-color: #272822;
|
| 37 |
+
}
|
| 38 |
+
.scrollable {
|
| 39 |
+
font-family:Menlo,'DejaVu Sans Mono',consolas,'Courier New',monospace;
|
| 40 |
+
height: 500px;
|
| 41 |
+
overflow: auto;
|
| 42 |
+
}
|
| 43 |
+
"""
|
| 44 |
+
style_tag.append(style_content)
|
| 45 |
+
|
| 46 |
+
return soup.prettify()
|