<p>I am planning to perform multiple routine NGS analyses for a hospital lab on patients' samples on an everyday basis.</p>
<p>Before I used a new tuxedo approach with <code>ballgown</code> etc and was rather satisfied with it.</p>
<p>I wonder if for the above-mentioned job it's ok to use a ballgown or, perhaps, that is not the best choice?</p>

CC BY-SA 4.0
2021-06-21T15:45:26.010Z
I'm fairly used to analyse NGS illumina data, but what is the New Tuxedo approach you mention? How do you measure best choice?
llrs
CC BY-SA 4.0
2021-06-23T12:53:42.513Z
Thanks I am talking about this approach https://www.nature.com/articles/nprot.2016.095
Mark
<bioconductor>
Is New Tuxedo approach really better than the earlier ones?
# Is New Tuxedo approach really better than the earlier ones?

(Asked by: username_0 on 2021-06-21)

I am planning to perform multiple routine NGS analyses for a hospital lab on patients' samples on an everyday basis.

Before I used a new tuxedo approach with `ballgown` etc and was rather satisfied with it.

I wonder if for the above-mentioned job it's ok to use a ballgown or, perhaps, that is not the best choice?

**Tags:** bioconductor
> **Comments:**
> **username_1**: I'm fairly used to analyse NGS illumina data, but what is the New Tuxedo approach you mention? How do you measure best choice?  
> **username_0**: Thanks I am talking about this approach https://www.nature.com/articles/nprot.2016.095  

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## 0 answers

