<p>MIR200A
MIR200B
MIR205
MIR3153
MIR3176
MIR4258
MIR4269
MIR429
MIR4664
MIR559
MIR6835</p>

CC BY-SA 4.0
2024-08-21T10:56:01.573Z
As it’s currently written, your answer is unclear. Please [edit] to add additional details that will help others understand how this addresses the question asked. You can find more information on how to write good answers [in the help center](/help/how-to-answer).
Community
CC BY-SA 4.0
2024-08-21T10:38:40.303Z
2024-08-21T10:38:40.303Z
soudabeh sabet
<p>I have a list of miRNAs IDs (2000-2500) that I want to find miRBase IDs for them. For example:</p>
<p>hsa-miR-106a ---&gt; hsa-miR-106a-5p
hsa-miR-373* --&gt; hsa-miR-373-5p
hsa-miR-33 --&gt; hsa-miR-33a-5p
I used many R packages and websites such as (miRBaseConverter, miRNAmeConverter, MiEAA, miRSystem,miRandola) but non of them give me the comprehensive result.</p>
<p>e.g. For &quot;hsa-mir-30c-1&quot; miRNAmeConverter did not give miRBase ID but if you search it in miRBase it hsa two matures IDs: hsa-miR-30c-5p &amp; hsa-miR-30c-1-3p.</p>
<p>miRBAseConverter is also like the mentioned one: It can not find the mature one for many miRNAs e.g. &quot;hsa-mir-34&quot; has to mature IDs: &quot;hsa-miR-34a-5p&quot; &amp; &quot;hsa-miR-34a-3p&quot; but despite having them miRBaseConverter could not retrieve them.
<a href="https://i.sstatic.net/X88g9.jpg" rel="nofollow noreferrer"><img src="https://i.sstatic.net/X88g9.jpg" alt="enter image description here" /></a></p>
<p>Can anyone suggest any tools that might help to do this?</p>

<r><python><bioconductor><computational-biochemistry>
Converting miRNA names to miRBase version IDs
# Converting miRNA names to miRBase version IDs

(Asked by: username_0 on 2021-11-18)

I have a list of miRNAs IDs (2000-2500) that I want to find miRBase IDs for them. For example:

hsa-miR-106a ---> hsa-miR-106a-5p
hsa-miR-373\* --> hsa-miR-373-5p
hsa-miR-33 --> hsa-miR-33a-5p
I used many R packages and websites such as (miRBaseConverter, miRNAmeConverter, MiEAA, miRSystem,miRandola) but non of them give me the comprehensive result.

e.g. For "hsa-mir-30c-1" miRNAmeConverter did not give miRBase ID but if you search it in miRBase it hsa two matures IDs: hsa-miR-30c-5p & hsa-miR-30c-1-3p.

miRBAseConverter is also like the mentioned one: It can not find the mature one for many miRNAs e.g. "hsa-mir-34" has to mature IDs: "hsa-miR-34a-5p" & "hsa-miR-34a-3p" but despite having them miRBaseConverter could not retrieve them.
[![enter image description here](https://i.sstatic.net/X88g9.jpg)](https://i.sstatic.net/X88g9.jpg)

Can anyone suggest any tools that might help to do this?

**Tags:** r, python, bioconductor, computational-biochemistry

---

## 1 answers

### Answer by username_1 on 2024-08-21. Score: -1

MIR200A
MIR200B
MIR205
MIR3153
MIR3176
MIR4258
MIR4269
MIR429
MIR4664
MIR559
MIR6835

> **Comments:**
> **username_2**: As it’s currently written, your answer is unclear. Please [edit] to add additional details that will help others understand how this addresses the question asked. You can find more information on how to write good answers [in the help center](/help/how-to-answer).  

---

