<p>How about:</p>
<ul>
<li><a href="http://www.informatics.jax.org/expression.shtml" rel="nofollow noreferrer">http://www.informatics.jax.org/expression.shtml</a></li>
<li><a href="http://www.emouseatlas.org/emage/home.php" rel="nofollow noreferrer">http://www.emouseatlas.org/emage/home.php</a></li>
</ul>
<p>Other potential databases of interest:</p>
<ul>
<li><a href="https://biokeanos.com/search?q=co-expression+%2Bmouse" rel="nofollow noreferrer">https://biokeanos.com/search?q=co-expression+%2Bmouse</a></li>
</ul>

CC BY-SA 4.0
2021-02-23T12:18:29.007Z
Thanks for your great answer!  The first two seems to be developmental expressions, while the third database is very helpful!  This site looks quite good: https://gemma.msl.ubc.ca/
jasperhyp
CC BY-SA 4.0
2021-02-23T09:50:06.163Z
2021-02-23T09:50:06.163Z
ellimilial
<p>I am currently working on gene clustering based on co-expression pattern in mouse brain. The problem is I do not have some solid way to test my result. Are there any suggestions for databases indicating groups of genes that co-express (in mouse brain), or even better indicating some similarity metrics between each pair of genes based on expression pattern?</p>
<p>Also, I do want some databases for differentially-expressed genes ;)</p>
<p>PS: By &quot;differentially-expressed&quot; I am referring to a pair of genes whose expression patterns in a single individual differ.</p>

<database><public-databases><differential-expression><gene-expression><coexpression>
Are there any databases for gene co-expression or expression pattern clustering?
# Are there any databases for gene co-expression or expression pattern clustering?

(Asked by: username_0 on 2021-02-23)

I am currently working on gene clustering based on co-expression pattern in mouse brain. The problem is I do not have some solid way to test my result. Are there any suggestions for databases indicating groups of genes that co-express (in mouse brain), or even better indicating some similarity metrics between each pair of genes based on expression pattern?

Also, I do want some databases for differentially-expressed genes ;)

PS: By "differentially-expressed" I am referring to a pair of genes whose expression patterns in a single individual differ.

**Tags:** database, public-databases, differential-expression, gene-expression, coexpression

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## 1 answers

### Answer by username_1 on 2021-02-23. Score: 1 | Accepted answer

How about:

* <http://www.informatics.jax.org/expression.shtml>
* <http://www.emouseatlas.org/emage/home.php>

Other potential databases of interest:

* <https://biokeanos.com/search?q=co-expression+%2Bmouse>

> **Comments:**
> **username_0**: Thanks for your great answer!  The first two seems to be developmental expressions, while the third database is very helpful!  This site looks quite good: https://gemma.msl.ubc.ca/  

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