jls205/mocha_gold · Datasets at Hugging Face

question stringlengths 113 233	answer stringlengths 134 454	answer_type stringclasses 1 value	id stringlengths 36 36
Using the data from mocha, what is the effect size and its confidence interval for the feature with gene_name 'DBT' under the contrast 'Glycerol - GLY'?	The effect size for the feature with gene_name 'DBT' under the contrast 'Glycerol - GLY' from mocha is -1.9916, with a confidence interval ranging from -7.9543 (low) to 3.9710 (high).	exactMatch	3cc6ed5e-69b9-4f12-a34e-900b7ed5226e
According to the data provided from mocha, what are the effect size and adjusted p-value (adj.P.Val) for the gene PPIH under the 'Glycerol - GLY' contrast, and what do these values suggest about statistical significance?	The effect size for gene PPIH under the 'Glycerol - GLY' contrast from mocha is -1.07634345029957, and the adjusted p-value (adj.P.Val) is 0.536340674723925. These values suggest that the effect is not statistically significant since the adjusted p-value is much greater than 0.05.	exactMatch	45f6f7d2-27f5-445e-8a56-9c226cfa7340
Based on data from mocha, what is the effect size and statistical significance (p-value and adjusted p-value) for the association between BMI and USP15 gene expression?	According to data from mocha, the effect size for the association between BMI and USP15 gene expression (feature_id: seq.19161.1) is 0.0036. The p-value is 0.4114 and the adjusted p-value (padj) is 0.7589, indicating that the association is not statistically significant.	exactMatch	4f1c66c9-ca5f-4575-ad84-bae672049ac1
Using the data provided from mocha, what is the effect size and confidence interval for the feature CEACAM19 in the 'LDL - Cholesterol 3' contrast?	From the mocha data, the feature CEACAM19 in the 'LDL - Cholesterol 3' contrast has an effect size of 0.05884, with a confidence interval ranging from -0.03321 (conf.low) to 0.15089 (conf.high).	exactMatch	ec8543a1-339e-414d-baed-560f9d82eaf4
Using data from mocha, what is the effect size and adjusted p-value (padj) for the gene CDCP1 in relation to the BMI contrast, and what do these values suggest about statistical significance?	From the mocha data, the effect size for the gene CDCP1 in the BMI contrast is 0.007085434769977. The adjusted p-value (padj) is 0.051481246878718. Since the adjusted p-value is slightly above the conventional threshold of 0.05, this suggests that the association is not statistically significant at the 5% level, though it is marginally nonsignificant.	exactMatch	fdaacdf8-0704-43c1-b515-9eac4a990ee4
Using the data from mocha, what is the effect size and adjusted p-value for IFNL3 in the Obese_vs_Lean contrast, and does this gene show a statistically significant difference in expression between the groups?	According to the data from mocha, the effect size for IFNL3 in the Obese_vs_Lean contrast is 0.0215698795394531, and the adjusted p-value (adj.P.Val) is 0.873057288826321. Since the adjusted p-value is much greater than 0.05, IFNL3 does not show a statistically significant difference in expression between obese and lean groups in this dataset.	exactMatch	a9e0fdaa-d087-46e0-b8db-1081e93ff9a3
According to the data from mocha, what is the effect size, p-value, and gene name associated with the term 'Diabetes' for the contrast 'T2D_vs_Healthy'?	Based on the mocha data, the effect size associated with 'Diabetes' for the contrast 'T2D_vs_Healthy' is 0.054905433435886. The p-value is 0.229907612375312, and the gene name is NTM.	exactMatch	b0f5d240-53df-41ff-9471-bb84c878fb1c
Using data from mocha, what is the adjusted p-value (adj.P.Val) for the effect of 'Glycerol - GLY' on gene 'ARNT', and is this result statistically significant?	According to the mocha data, the adjusted p-value (adj.P.Val) for the effect of 'Glycerol - GLY' on gene 'ARNT' is 0.94039395354848. This value is much higher than the typical significance threshold of 0.05, indicating that the result is not statistically significant.	exactMatch	a12bd708-86ba-441f-90c8-495c4b929678
Using data from the mocha dataset, what is the effect size and statistical significance (adjusted p-value) for the association between 'VLDLR' and 'HDL - Cholesterol 4'?	According to the mocha dataset, the effect size for the association between 'VLDLR' (gene_name) and 'HDL - Cholesterol 4' (term) is -0.0606861095874209. The adjusted p-value (adj.P.Val) for this association is 0.500563890735512, indicating that the result is not statistically significant.	exactMatch	03587861-75d5-4a96-8e9b-ffc794bb5e7a
Based on the mocha data, what is the effect size and confidence interval for the association between the gene TGFB1 and Triglycerides (TRIGL)?	From the mocha data, the effect size for the association between TGFB1 and Triglycerides (TRIGL) is -0.0196. The 95% confidence interval ranges from -0.07698 to 0.03784.	exactMatch	e6ba7cf3-b62f-4035-95d4-a43915e984eb
Using the data from mocha, what is the effect size and the adjusted p-value for the association between the term 'Diabetes' and the gene 'FUT5' in the contrast 'T2D_vs_Healthy'?	According to the mocha data, the effect size for the association between 'Diabetes' and the gene 'FUT5' in the 'T2D_vs_Healthy' contrast is 0.285150103658416, and the adjusted p-value (adj.P.Val) is 0.0027191871681293.	exactMatch	fc3d7f29-d5db-4571-9293-e218a2efee71
Using the data from mocha, what is the effect size and adjusted p-value (adj.P.Val) for the association between BMI and the gene FLI1?	According to the mocha data, the effect size for the association between BMI and the gene FLI1 is 0.006597 (rounded), and the adjusted p-value (adj.P.Val) is 0.872948.	exactMatch	eb77b4a6-1024-49b0-aa1e-b1d2fbfa2370
Using the data from mocha, what is the effect size and confidence interval for the association between INPP5A and LDL - Cholesterol 3?	According to the mocha data, the effect size for the association between INPP5A and LDL - Cholesterol 3 is 0.218370287660502. The 95% confidence interval ranges from -0.372505540225044 to 0.809246115546049.	exactMatch	8af3802b-a3a6-4b27-aeff-3a79c477aee5
Using the data from mocha, what is the adjusted p-value (padj) for the association between the gene TCP1 and BMI?	The adjusted p-value (padj) for the association between the gene TCP1 and BMI, according to the data from mocha, is 0.880129956553584.	exactMatch	c98c07f8-7ea3-4b33-9861-c5157066ee56
Using the data from Mocha, what is the effect size and its confidence interval for Apolipoprotein B-100, and what does the p-value indicate about its statistical significance?	According to the data from Mocha, the effect size for Apolipoprotein B-100 is 0.238370283342863. The confidence interval for the effect size ranges from -1.73578215421811 (conf.low) to 2.21252272090384 (conf.high). The p-value for this effect is 0.578521286815804 and the adjusted p-value is 0.7738067708071. These values suggest that the effect is not statistically significant, as both p-values are much higher than the commonly used threshold of 0.05.	exactMatch	55ea4b5f-90f4-4fa7-acf2-49d968ac28e9
According to the mocha dataset, what is the p-value and adjusted p-value for the association between the gene AMIGO1 and Triglycerides (TRIGL)?	From the mocha data, the p-value for the association between AMIGO1 and Triglycerides (TRIGL) is 0.044777941439973, and the adjusted p-value is 0.115992397061055.	exactMatch	b3e0c1aa-09aa-4273-8bcb-42d20a9cab56
According to the data from mocha, what is the feature ID, effect size, and adjusted p-value for the gene RMDN3 associated with Triglycerides (TRIGL)?	In the data from mocha, the gene RMDN3 associated with Triglycerides (TRIGL) has a feature ID of 'seq.9290.8', an effect size of 0.0268307428200578, and an adjusted p-value (adj.P.Val) of 0.39906366098895.	exactMatch	7c61223f-4099-47e4-9724-4e0b6ddc2e0b
Based on data from mocha, what is the adjusted p-value (padj) for the association between the gene COLEC10 and the term 'Glycerol - GLY'?	According to the provided mocha data, the adjusted p-value (padj) for the association between COLEC10 and 'Glycerol - GLY' is 0.882900191598273.	exactMatch	5a67535d-5503-4e18-afb9-a945ed1e8b3a
According to the data from mocha, what is the observed effect size and adjusted p-value for the feature 'seq.25898.4' (associated with gene CHID1 and the term 'HDL - Cholesterol 4')?	The effect size for feature 'seq.25898.4' in the data from mocha is -0.0816345061639858, and the adjusted p-value (adj.P.Val or padj) is 0.416410069340254.	exactMatch	1954f821-8b21-4505-8a99-fd2edad4144d
Based on the mocha data, what is the effect size and the adjusted p-value (padj) for the association between BMI and the gene PIEZO1?	According to the mocha data, the effect size for the association between BMI and the gene PIEZO1 is -0.0020491490480448, and the adjusted p-value (padj) is 0.801444124911193.	exactMatch	c332e3bd-3326-4d7a-aebf-37deba9588a1
Using data from mocha, what is the p-value and adjusted p-value for the association of gene KCNAB2 with Diabetes in the T2D_vs_Healthy contrast, and what do these values indicate?	According to data from mocha, the p-value for the association of gene KCNAB2 with Diabetes (in the T2D_vs_Healthy contrast) is 0.933525192973339, and the adjusted p-value (adj.P.Val) is 0.959086786118974. These high p-values indicate that there is no statistically significant association between KCNAB2 expression and Diabetes in this comparison.	exactMatch	a81f0973-36c5-49fd-a494-c33888335f42
Using the data provided from mocha, what is the effect size of BMI on the expression of the gene HIKESHI, and what does the adjusted p-value indicate about the statistical significance of this finding?	From the mocha data, the effect size of BMI on the expression of the gene HIKESHI is 0.0022701675790866. The adjusted p-value (adj.P.Val or padj) is 0.191443122120489, which is greater than the commonly used threshold of 0.05, indicating that the association is not statistically significant after correcting for multiple testing.	exactMatch	ab536ac9-467b-4aeb-9242-1efe00dfa76c
Based on the data from mocha, what is the effect size and statistical significance (adjusted p-value) of the association between LDL - Cholesterol 3 and the gene HAMP?	According to mocha, the effect size of the association between LDL - Cholesterol 3 and the gene HAMP is -0.14575, and the adjusted p-value (adj.P.Val) is 0.53637, indicating the association is not statistically significant.	exactMatch	9cb0a0d6-cb4f-4b49-9501-d8f765b47db4
Based on the data from mocha, what is the effect size and statistical significance of the gene STAMBP in the T2D_vs_Healthy contrast for the term 'Diabetes'?	According to the mocha data, the gene STAMBP (feature_id: seq.19187.21) has an effect size of -0.31448732792892 in the T2D_vs_Healthy contrast for the term 'Diabetes'. The p-value is 0.0002787885730137 and the adjusted p-value (padj) is 0.0014633958797139, indicating statistical significance.	exactMatch	f5c4385c-2fb0-4611-8702-aedeec33cf1d
Using the data from mocha, what is the effect size and p-value for the association between VANGL1 and Triglycerides - TRIGL, and is this association statistically significant?	According to the data from mocha, the effect size for the association between VANGL1 and Triglycerides - TRIGL is 0.0341, and the p-value is 0.15. Since the p-value is greater than 0.05, this association is not statistically significant.	exactMatch	69fbe567-1810-4971-809f-4f2e975c06be
Based on the data from mocha, what is the effect size and its confidence interval for the feature associated with gene 'ID2' in the 'HDL - Cholesterol 4' contrast?	According to the mocha data, the effect size for gene 'ID2' in the 'HDL - Cholesterol 4' contrast is -0.0981, with a confidence interval ranging from -0.4220 (conf.low) to 0.2257 (conf.high).	exactMatch	d6e98ba9-bb2a-40df-ae85-f8fb8e54dd53
According to the data from mocha, what is the adjusted p-value (adj.P.Val) for the association between the gene GNRH2 and 'LDL - Cholesterol 3'?	The adjusted p-value (adj.P.Val) for the association between the gene GNRH2 and 'LDL - Cholesterol 3' according to the mocha data is 0.349168875906249.	exactMatch	2afd406d-270d-4a7d-a840-082c05a6ca40
Using the data from mocha, what is the effect size and its confidence interval for the feature 'seq.5404.53' associated with the term 'Glycerol - GLY'?	According to the data from mocha, the effect size for feature 'seq.5404.53' (associated with 'Glycerol - GLY') is 0.2635. The confidence interval for this effect size ranges from -1.0850 (conf.low) to 1.6121 (conf.high).	exactMatch	74a7fea1-741f-488e-b773-fa33f30d3b7e
Using the data from mocha, what is the effect size and its confidence interval for the association between BMI and CD14 expression levels?	According to the data from mocha, the effect size for the association between BMI and CD14 expression levels is -0.0010610028398932, with a 95% confidence interval ranging from -0.0086298006974904 to 0.0065077950177039.	exactMatch	3fe73efa-7096-4a87-846b-a6ee5ae2089f
Using the data from mocha, what is the average expression (AveExpr) value for the gene IL20RB in the 'Glycerol - GLY' contrast, and what does it indicate about its expression level?	The average expression (AveExpr) value for the gene IL20RB in the 'Glycerol - GLY' contrast is 9.68697981074943, according to the data from mocha. This value suggests that IL20RB is expressed at a relatively high level in this experimental condition.	exactMatch	622fc7f8-36ff-4221-a214-6af70471c897
Based on data from mocha, what is the adjusted p-value and the observed effect size for the gene PQBP1 in the Obese_vs_Lean contrast for the term Obesity?	According to mocha, for the gene PQBP1 in the Obese_vs_Lean contrast for Obesity, the adjusted p-value (adj.P.Val or padj) is 0.774191047928479, and the observed effect size is -0.0453356424133716.	exactMatch	716cffc1-7161-4e61-8d8b-e19d613eb2e7
Using the data from mocha, what is the adjusted p-value (padj) for the gene TIGIT in the Obese_vs_Lean contrast, and does TIGIT show a statistically significant association with Obesity?	From the mocha data, the adjusted p-value (padj) for the gene TIGIT in the Obese_vs_Lean contrast is 0.64828089661556. This value is much higher than commonly used significance thresholds (e.g., 0.05), indicating that TIGIT does not show a statistically significant association with Obesity in this analysis.	exactMatch	15cae65c-1cc7-47a5-aefa-a5d889198714
Based on the data provided from mocha, what is the feature ID and the effect size for the gene UNC45A in the 'Glycerol - GLY' contrast?	According to the data from mocha, the feature ID for the gene UNC45A in the 'Glycerol - GLY' contrast is 'seq.11712.207', and the effect size is -1.49320266911048.	exactMatch	1a4b9b17-7039-40ad-9dad-8c2d51086c97
Using data from mocha, what is the effect size and adjusted p-value for the feature 'seq.6447.73', corresponding to gene 'PTX3' under the contrast 'LDL - Cholesterol 3'?	According to data from mocha, the effect size for the feature 'seq.6447.73', corresponding to gene 'PTX3' under the contrast 'LDL - Cholesterol 3', is 0.01356388283098. The adjusted p-value (adj.P.Val) is 0.581366991262458.	exactMatch	a373fc02-3243-4e5f-9a4d-a955a8949d53
Using the data from mocha, what is the p-value and adjusted p-value for the BMI contrast associated with the gene ST8SIA6, and what does this suggest about statistical significance?	According to the mocha data, for the BMI contrast with gene ST8SIA6, the p-value is 0.0446 and the adjusted p-value (adj.P.Val or padj) is 0.2608. While the raw p-value is below 0.05, indicating nominal significance, the adjusted p-value is above the conventional threshold (0.05), suggesting the result is not statistically significant after correction for multiple testing.	exactMatch	a571eae8-ba27-4d55-b13e-de2814b6eafc
Using the data from mocha, what does the negative effect size for feature_id 'seq.6593.5' associated with 'LDL - Cholesterol 3' and gene 'GALNT3' indicate about the relationship between GALNT3 expression and LDL cholesterol levels?	The negative effect size (-0.0195) in the mocha data for feature_id 'seq.6593.5' suggests that higher expression of the gene GALNT3 is associated with lower LDL cholesterol levels (specifically under the 'LDL - Cholesterol 3' contrast). However, the p-value (0.122) and adjusted p-value (0.41) indicate that this association is not statistically significant.	exactMatch	dad826da-d31d-497c-bedb-94fd7b197b99
According to the data from mocha, what are the effect size, confidence interval, and adjusted p-value for the association between BMI and expression of the gene NARS2 (feature_id seq.23658.1)?	From the mocha data, for the feature_id 'seq.23658.1' (gene NARS2) with the contrast BMI, the effect size is 0.0002698940581609. The 95% confidence interval ranges from -0.0066189646558711 (conf.low) to 0.0071587527721929 (conf.high). The adjusted p-value (adj.P.Val) is 0.954040132837216.	exactMatch	bd3caa76-d968-447d-8cdf-d7bcd97c1415
According to data from mocha, what is the effect size and adjusted p-value (adj.P.Val) for the association between the gene MINAR1 and triglyceride levels (Triglycerides - TRIGL)?	From the mocha data, the effect size for the association between MINAR1 and triglyceride levels is 0.0339345061076152, and the adjusted p-value (adj.P.Val) is 0.204901254093141.	exactMatch	d93c669c-5e1f-4992-ab45-dda1e7161e4f
According to the data from mocha, what is the effect size and adjusted p-value (adj.P.Val) for the association between the gene PDLIM3 and cholesterol (CHOL2-I)?	Based on the mocha data, the effect size for the association between the gene PDLIM3 and cholesterol (CHOL2-I) is -0.142661462418409, and the adjusted p-value (adj.P.Val) is 0.0852145399208365.	exactMatch	c9e39209-3fb0-43c1-b3db-14240eb42fbe
Based on the mocha data for the feature 'seq.12460.18' corresponding to gene PSMA7 and the term 'HDL - Cholesterol 4', what is the adjusted p-value (adj.P.Val), and does this indicate statistical significance for the contrast tested?	The adjusted p-value (adj.P.Val) for the contrast 'HDL - Cholesterol 4' with gene PSMA7, according to the mocha data, is 0.492885873656182. This value is well above the common cutoff for significance (0.05), so it does not indicate statistical significance for the contrast tested.	exactMatch	855886c9-1b68-499f-9b6c-a15a1026882a
Using data from mocha, what is the effect size and adjusted p-value (padj) for the association of 'Obesity' with the gene CNOT9 under the 'Obese_vs_Lean' contrast?	Based on the data from mocha, the effect size for the association of 'Obesity' with the gene CNOT9 (contrast: Obese_vs_Lean) is 0.345145211241505, and the adjusted p-value (padj) is 0.0772533280760196.	exactMatch	d5c7db08-fdbd-4d11-96e0-046535c0b25b
Using data from mocha, what is the effect size and adjusted p-value for the association between BMI and the gene THSD7A?	From the mocha dataset, for the contrast with BMI and the gene THSD7A, the effect size is 0.0107329551867226 and the adjusted p-value (adj.P.Val) is 0.239436538591421.	exactMatch	aef7ccd2-cc2f-42c3-ab32-0de2689449fd
Using the mocha dataset, what was the effect size of BMI on CCL14 expression, and what were the confidence interval bounds for this effect?	According to the mocha data, the effect size of BMI on CCL14 expression was 0.0073247563981738, with a confidence interval ranging from -0.0086968567173942 (lower bound) to 0.023346369513742 (upper bound).	exactMatch	ebbd573a-4e1b-4b26-b9cc-65197c17641a
Using the provided data from mocha, what is the estimated effect size and its 95% confidence interval for the association between the gene NPPB and 'LDL - Cholesterol 3'?	According to the mocha data, the estimated effect size for the association between gene NPPB and 'LDL - Cholesterol 3' is 0.00252, with a 95% confidence interval ranging from -0.3131 to 0.3181.	exactMatch	4e25cbbf-1cbf-4c46-94e1-181c5cf63b8e
Based on data from mocha, what is the effect size and adjusted p-value for the association between the feature 'seq.6528.95' (gene EXTL2) and the term 'HDL - Cholesterol 4'?	According to the data from mocha, the effect size for the association between feature 'seq.6528.95' (gene EXTL2) and 'HDL - Cholesterol 4' is -0.120023864725768. The adjusted p-value (adj.P.Val/padj) for this association is 0.0094465104188019.	exactMatch	389468e0-ea76-4356-874c-c504f2cb8437
Using the data from mocha, what is the adjusted p-value (padj) for the association between BMI and expression of the gene CSTPP1, and is this association statistically significant?	The adjusted p-value (padj) for the association between BMI and expression of CSTPP1, according to mocha, is 0.0816476889334655. This value is above the commonly used threshold of 0.05, so the association is not considered statistically significant after adjustment.	exactMatch	b8f7a9bb-b0a3-4a52-b53c-97bbd4d79eac
Using data from mocha, what is the adjusted p-value for the association between 'Glycerol - GLY' and the gene 'IL5', and is this association considered statistically significant?	The adjusted p-value for the association between 'Glycerol - GLY' and the gene 'IL5' from mocha is 0.464672208464056. Since this value is greater than the common significance threshold of 0.05, the association is not considered statistically significant.	exactMatch	87e34bef-61e6-49c8-9f18-4fb35963cead
Using the data from mocha, what is the effect size of the gene PTS in the cholesterol - CHOL2-I contrast, and is this result statistically significant?	According to the mocha data, the effect size for the gene PTS in the cholesterol - CHOL2-I contrast is -0.0062132675797879. The adjusted p-value is 0.985112268226404, which indicates that the result is not statistically significant.	exactMatch	3e13ced6-05fe-44f4-aafd-5a3954a8b270
Based on mocha data for the gene ANGPTL4, what is the effect size of its association with 'LDL - Cholesterol 3', and is this association statistically significant?	From the mocha data, the effect size of ANGPTL4 with respect to 'LDL - Cholesterol 3' is -0.0263492910162372. The p-value is 0.154029012873396 and the adjusted p-value is 0.462330859080047, indicating that this association is not statistically significant.	exactMatch	c94ddf59-1bbb-4282-96fa-93a153fa5019
According to the data from mocha, what is the p-value and adjusted p-value (padj) for ARFIP1 in the 'Glycerol - GLY' contrast, and what do these values suggest about statistical significance?	The p-value for ARFIP1 in the 'Glycerol - GLY' contrast from mocha is 0.200193962302679, and the adjusted p-value (padj) is 0.428970224198174. These values are both greater than the common significance threshold of 0.05, suggesting that the observed effect is not statistically significant.	exactMatch	0eab6dae-cb5b-407b-a70c-9c8c39722c15

Using the data from mocha, what is the effect size and its confidence interval for the feature with gene_name 'DBT' under the contrast 'Glycerol - GLY'?

The effect size for the feature with gene_name 'DBT' under the contrast 'Glycerol - GLY' from mocha is -1.9916, with a confidence interval ranging from -7.9543 (low) to 3.9710 (high).

exactMatch

3cc6ed5e-69b9-4f12-a34e-900b7ed5226e

According to the data provided from mocha, what are the effect size and adjusted p-value (adj.P.Val) for the gene PPIH under the 'Glycerol - GLY' contrast, and what do these values suggest about statistical significance?

The effect size for gene PPIH under the 'Glycerol - GLY' contrast from mocha is -1.07634345029957, and the adjusted p-value (adj.P.Val) is 0.536340674723925. These values suggest that the effect is not statistically significant since the adjusted p-value is much greater than 0.05.

exactMatch

45f6f7d2-27f5-445e-8a56-9c226cfa7340

Based on data from mocha, what is the effect size and statistical significance (p-value and adjusted p-value) for the association between BMI and USP15 gene expression?

According to data from mocha, the effect size for the association between BMI and USP15 gene expression (feature_id: seq.19161.1) is 0.0036. The p-value is 0.4114 and the adjusted p-value (padj) is 0.7589, indicating that the association is not statistically significant.

exactMatch

4f1c66c9-ca5f-4575-ad84-bae672049ac1

Using the data provided from mocha, what is the effect size and confidence interval for the feature CEACAM19 in the 'LDL - Cholesterol 3' contrast?

From the mocha data, the feature CEACAM19 in the 'LDL - Cholesterol 3' contrast has an effect size of 0.05884, with a confidence interval ranging from -0.03321 (conf.low) to 0.15089 (conf.high).

exactMatch

ec8543a1-339e-414d-baed-560f9d82eaf4

Using data from mocha, what is the effect size and adjusted p-value (padj) for the gene CDCP1 in relation to the BMI contrast, and what do these values suggest about statistical significance?

From the mocha data, the effect size for the gene CDCP1 in the BMI contrast is 0.007085434769977. The adjusted p-value (padj) is 0.051481246878718. Since the adjusted p-value is slightly above the conventional threshold of 0.05, this suggests that the association is not statistically significant at the 5% level, though it is marginally nonsignificant.

exactMatch

fdaacdf8-0704-43c1-b515-9eac4a990ee4

Using the data from mocha, what is the effect size and adjusted p-value for IFNL3 in the Obese_vs_Lean contrast, and does this gene show a statistically significant difference in expression between the groups?

According to the data from mocha, the effect size for IFNL3 in the Obese_vs_Lean contrast is 0.0215698795394531, and the adjusted p-value (adj.P.Val) is 0.873057288826321. Since the adjusted p-value is much greater than 0.05, IFNL3 does not show a statistically significant difference in expression between obese and lean groups in this dataset.

exactMatch

a9e0fdaa-d087-46e0-b8db-1081e93ff9a3

According to the data from mocha, what is the effect size, p-value, and gene name associated with the term 'Diabetes' for the contrast 'T2D_vs_Healthy'?

Based on the mocha data, the effect size associated with 'Diabetes' for the contrast 'T2D_vs_Healthy' is 0.054905433435886. The p-value is 0.229907612375312, and the gene name is NTM.

exactMatch

b0f5d240-53df-41ff-9471-bb84c878fb1c

Using data from mocha, what is the adjusted p-value (adj.P.Val) for the effect of 'Glycerol - GLY' on gene 'ARNT', and is this result statistically significant?

According to the mocha data, the adjusted p-value (adj.P.Val) for the effect of 'Glycerol - GLY' on gene 'ARNT' is 0.94039395354848. This value is much higher than the typical significance threshold of 0.05, indicating that the result is not statistically significant.

exactMatch

a12bd708-86ba-441f-90c8-495c4b929678

Using data from the mocha dataset, what is the effect size and statistical significance (adjusted p-value) for the association between 'VLDLR' and 'HDL - Cholesterol 4'?

According to the mocha dataset, the effect size for the association between 'VLDLR' (gene_name) and 'HDL - Cholesterol 4' (term) is -0.0606861095874209. The adjusted p-value (adj.P.Val) for this association is 0.500563890735512, indicating that the result is not statistically significant.

exactMatch

03587861-75d5-4a96-8e9b-ffc794bb5e7a

Based on the mocha data, what is the effect size and confidence interval for the association between the gene TGFB1 and Triglycerides (TRIGL)?

From the mocha data, the effect size for the association between TGFB1 and Triglycerides (TRIGL) is -0.0196. The 95% confidence interval ranges from -0.07698 to 0.03784.

exactMatch

e6ba7cf3-b62f-4035-95d4-a43915e984eb

Using the data from mocha, what is the effect size and the adjusted p-value for the association between the term 'Diabetes' and the gene 'FUT5' in the contrast 'T2D_vs_Healthy'?

According to the mocha data, the effect size for the association between 'Diabetes' and the gene 'FUT5' in the 'T2D_vs_Healthy' contrast is 0.285150103658416, and the adjusted p-value (adj.P.Val) is 0.0027191871681293.

exactMatch

fc3d7f29-d5db-4571-9293-e218a2efee71

Using the data from mocha, what is the effect size and adjusted p-value (adj.P.Val) for the association between BMI and the gene FLI1?

According to the mocha data, the effect size for the association between BMI and the gene FLI1 is 0.006597 (rounded), and the adjusted p-value (adj.P.Val) is 0.872948.

exactMatch

eb77b4a6-1024-49b0-aa1e-b1d2fbfa2370

Using the data from mocha, what is the effect size and confidence interval for the association between INPP5A and LDL - Cholesterol 3?

According to the mocha data, the effect size for the association between INPP5A and LDL - Cholesterol 3 is 0.218370287660502. The 95% confidence interval ranges from -0.372505540225044 to 0.809246115546049.

exactMatch

8af3802b-a3a6-4b27-aeff-3a79c477aee5

Using the data from mocha, what is the adjusted p-value (padj) for the association between the gene TCP1 and BMI?

The adjusted p-value (padj) for the association between the gene TCP1 and BMI, according to the data from mocha, is 0.880129956553584.

exactMatch

c98c07f8-7ea3-4b33-9861-c5157066ee56

Using the data from Mocha, what is the effect size and its confidence interval for Apolipoprotein B-100, and what does the p-value indicate about its statistical significance?

According to the data from Mocha, the effect size for Apolipoprotein B-100 is 0.238370283342863. The confidence interval for the effect size ranges from -1.73578215421811 (conf.low) to 2.21252272090384 (conf.high). The p-value for this effect is 0.578521286815804 and the adjusted p-value is 0.7738067708071. These values suggest that the effect is not statistically significant, as both p-values are much higher than the commonly used threshold of 0.05.

exactMatch

55ea4b5f-90f4-4fa7-acf2-49d968ac28e9

According to the mocha dataset, what is the p-value and adjusted p-value for the association between the gene AMIGO1 and Triglycerides (TRIGL)?

From the mocha data, the p-value for the association between AMIGO1 and Triglycerides (TRIGL) is 0.044777941439973, and the adjusted p-value is 0.115992397061055.

exactMatch

b3e0c1aa-09aa-4273-8bcb-42d20a9cab56

According to the data from mocha, what is the feature ID, effect size, and adjusted p-value for the gene RMDN3 associated with Triglycerides (TRIGL)?

In the data from mocha, the gene RMDN3 associated with Triglycerides (TRIGL) has a feature ID of 'seq.9290.8', an effect size of 0.0268307428200578, and an adjusted p-value (adj.P.Val) of 0.39906366098895.

exactMatch

7c61223f-4099-47e4-9724-4e0b6ddc2e0b

Based on data from mocha, what is the adjusted p-value (padj) for the association between the gene COLEC10 and the term 'Glycerol - GLY'?

According to the provided mocha data, the adjusted p-value (padj) for the association between COLEC10 and 'Glycerol - GLY' is 0.882900191598273.

exactMatch

5a67535d-5503-4e18-afb9-a945ed1e8b3a

According to the data from mocha, what is the observed effect size and adjusted p-value for the feature 'seq.25898.4' (associated with gene CHID1 and the term 'HDL - Cholesterol 4')?

The effect size for feature 'seq.25898.4' in the data from mocha is -0.0816345061639858, and the adjusted p-value (adj.P.Val or padj) is 0.416410069340254.

exactMatch

1954f821-8b21-4505-8a99-fd2edad4144d

Based on the mocha data, what is the effect size and the adjusted p-value (padj) for the association between BMI and the gene PIEZO1?

According to the mocha data, the effect size for the association between BMI and the gene PIEZO1 is -0.0020491490480448, and the adjusted p-value (padj) is 0.801444124911193.

exactMatch

c332e3bd-3326-4d7a-aebf-37deba9588a1

Using data from mocha, what is the p-value and adjusted p-value for the association of gene KCNAB2 with Diabetes in the T2D_vs_Healthy contrast, and what do these values indicate?

According to data from mocha, the p-value for the association of gene KCNAB2 with Diabetes (in the T2D_vs_Healthy contrast) is 0.933525192973339, and the adjusted p-value (adj.P.Val) is 0.959086786118974. These high p-values indicate that there is no statistically significant association between KCNAB2 expression and Diabetes in this comparison.

exactMatch

a81f0973-36c5-49fd-a494-c33888335f42

Using the data provided from mocha, what is the effect size of BMI on the expression of the gene HIKESHI, and what does the adjusted p-value indicate about the statistical significance of this finding?

From the mocha data, the effect size of BMI on the expression of the gene HIKESHI is 0.0022701675790866. The adjusted p-value (adj.P.Val or padj) is 0.191443122120489, which is greater than the commonly used threshold of 0.05, indicating that the association is not statistically significant after correcting for multiple testing.

exactMatch

ab536ac9-467b-4aeb-9242-1efe00dfa76c

Based on the data from mocha, what is the effect size and statistical significance (adjusted p-value) of the association between LDL - Cholesterol 3 and the gene HAMP?

According to mocha, the effect size of the association between LDL - Cholesterol 3 and the gene HAMP is -0.14575, and the adjusted p-value (adj.P.Val) is 0.53637, indicating the association is not statistically significant.

exactMatch

9cb0a0d6-cb4f-4b49-9501-d8f765b47db4

Based on the data from mocha, what is the effect size and statistical significance of the gene STAMBP in the T2D_vs_Healthy contrast for the term 'Diabetes'?

According to the mocha data, the gene STAMBP (feature_id: seq.19187.21) has an effect size of -0.31448732792892 in the T2D_vs_Healthy contrast for the term 'Diabetes'. The p-value is 0.0002787885730137 and the adjusted p-value (padj) is 0.0014633958797139, indicating statistical significance.

exactMatch

f5c4385c-2fb0-4611-8702-aedeec33cf1d

Using the data from mocha, what is the effect size and p-value for the association between VANGL1 and Triglycerides - TRIGL, and is this association statistically significant?

According to the data from mocha, the effect size for the association between VANGL1 and Triglycerides - TRIGL is 0.0341, and the p-value is 0.15. Since the p-value is greater than 0.05, this association is not statistically significant.

exactMatch

69fbe567-1810-4971-809f-4f2e975c06be

Based on the data from mocha, what is the effect size and its confidence interval for the feature associated with gene 'ID2' in the 'HDL - Cholesterol 4' contrast?

According to the mocha data, the effect size for gene 'ID2' in the 'HDL - Cholesterol 4' contrast is -0.0981, with a confidence interval ranging from -0.4220 (conf.low) to 0.2257 (conf.high).

exactMatch

d6e98ba9-bb2a-40df-ae85-f8fb8e54dd53

According to the data from mocha, what is the adjusted p-value (adj.P.Val) for the association between the gene GNRH2 and 'LDL - Cholesterol 3'?

The adjusted p-value (adj.P.Val) for the association between the gene GNRH2 and 'LDL - Cholesterol 3' according to the mocha data is 0.349168875906249.

exactMatch

2afd406d-270d-4a7d-a840-082c05a6ca40

Using the data from mocha, what is the effect size and its confidence interval for the feature 'seq.5404.53' associated with the term 'Glycerol - GLY'?

According to the data from mocha, the effect size for feature 'seq.5404.53' (associated with 'Glycerol - GLY') is 0.2635. The confidence interval for this effect size ranges from -1.0850 (conf.low) to 1.6121 (conf.high).

exactMatch

74a7fea1-741f-488e-b773-fa33f30d3b7e

Using the data from mocha, what is the effect size and its confidence interval for the association between BMI and CD14 expression levels?

According to the data from mocha, the effect size for the association between BMI and CD14 expression levels is -0.0010610028398932, with a 95% confidence interval ranging from -0.0086298006974904 to 0.0065077950177039.

exactMatch

3fe73efa-7096-4a87-846b-a6ee5ae2089f

Using the data from mocha, what is the average expression (AveExpr) value for the gene IL20RB in the 'Glycerol - GLY' contrast, and what does it indicate about its expression level?

The average expression (AveExpr) value for the gene IL20RB in the 'Glycerol - GLY' contrast is 9.68697981074943, according to the data from mocha. This value suggests that IL20RB is expressed at a relatively high level in this experimental condition.

exactMatch

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Based on data from mocha, what is the adjusted p-value and the observed effect size for the gene PQBP1 in the Obese_vs_Lean contrast for the term Obesity?

According to mocha, for the gene PQBP1 in the Obese_vs_Lean contrast for Obesity, the adjusted p-value (adj.P.Val or padj) is 0.774191047928479, and the observed effect size is -0.0453356424133716.

exactMatch

716cffc1-7161-4e61-8d8b-e19d613eb2e7

Using the data from mocha, what is the adjusted p-value (padj) for the gene TIGIT in the Obese_vs_Lean contrast, and does TIGIT show a statistically significant association with Obesity?

From the mocha data, the adjusted p-value (padj) for the gene TIGIT in the Obese_vs_Lean contrast is 0.64828089661556. This value is much higher than commonly used significance thresholds (e.g., 0.05), indicating that TIGIT does not show a statistically significant association with Obesity in this analysis.

exactMatch

15cae65c-1cc7-47a5-aefa-a5d889198714

Based on the data provided from mocha, what is the feature ID and the effect size for the gene UNC45A in the 'Glycerol - GLY' contrast?

According to the data from mocha, the feature ID for the gene UNC45A in the 'Glycerol - GLY' contrast is 'seq.11712.207', and the effect size is -1.49320266911048.

exactMatch

1a4b9b17-7039-40ad-9dad-8c2d51086c97

Using data from mocha, what is the effect size and adjusted p-value for the feature 'seq.6447.73', corresponding to gene 'PTX3' under the contrast 'LDL - Cholesterol 3'?

According to data from mocha, the effect size for the feature 'seq.6447.73', corresponding to gene 'PTX3' under the contrast 'LDL - Cholesterol 3', is 0.01356388283098. The adjusted p-value (adj.P.Val) is 0.581366991262458.

exactMatch

a373fc02-3243-4e5f-9a4d-a955a8949d53

Using the data from mocha, what is the p-value and adjusted p-value for the BMI contrast associated with the gene ST8SIA6, and what does this suggest about statistical significance?

According to the mocha data, for the BMI contrast with gene ST8SIA6, the p-value is 0.0446 and the adjusted p-value (adj.P.Val or padj) is 0.2608. While the raw p-value is below 0.05, indicating nominal significance, the adjusted p-value is above the conventional threshold (0.05), suggesting the result is not statistically significant after correction for multiple testing.

exactMatch

a571eae8-ba27-4d55-b13e-de2814b6eafc

Using the data from mocha, what does the negative effect size for feature_id 'seq.6593.5' associated with 'LDL - Cholesterol 3' and gene 'GALNT3' indicate about the relationship between GALNT3 expression and LDL cholesterol levels?

The negative effect size (-0.0195) in the mocha data for feature_id 'seq.6593.5' suggests that higher expression of the gene GALNT3 is associated with lower LDL cholesterol levels (specifically under the 'LDL - Cholesterol 3' contrast). However, the p-value (0.122) and adjusted p-value (0.41) indicate that this association is not statistically significant.

exactMatch

dad826da-d31d-497c-bedb-94fd7b197b99

According to the data from mocha, what are the effect size, confidence interval, and adjusted p-value for the association between BMI and expression of the gene NARS2 (feature_id seq.23658.1)?

From the mocha data, for the feature_id 'seq.23658.1' (gene NARS2) with the contrast BMI, the effect size is 0.0002698940581609. The 95% confidence interval ranges from -0.0066189646558711 (conf.low) to 0.0071587527721929 (conf.high). The adjusted p-value (adj.P.Val) is 0.954040132837216.

exactMatch

bd3caa76-d968-447d-8cdf-d7bcd97c1415

According to data from mocha, what is the effect size and adjusted p-value (adj.P.Val) for the association between the gene MINAR1 and triglyceride levels (Triglycerides - TRIGL)?

From the mocha data, the effect size for the association between MINAR1 and triglyceride levels is 0.0339345061076152, and the adjusted p-value (adj.P.Val) is 0.204901254093141.

exactMatch

d93c669c-5e1f-4992-ab45-dda1e7161e4f

According to the data from mocha, what is the effect size and adjusted p-value (adj.P.Val) for the association between the gene PDLIM3 and cholesterol (CHOL2-I)?

Based on the mocha data, the effect size for the association between the gene PDLIM3 and cholesterol (CHOL2-I) is -0.142661462418409, and the adjusted p-value (adj.P.Val) is 0.0852145399208365.

exactMatch

c9e39209-3fb0-43c1-b3db-14240eb42fbe

Based on the mocha data for the feature 'seq.12460.18' corresponding to gene PSMA7 and the term 'HDL - Cholesterol 4', what is the adjusted p-value (adj.P.Val), and does this indicate statistical significance for the contrast tested?

The adjusted p-value (adj.P.Val) for the contrast 'HDL - Cholesterol 4' with gene PSMA7, according to the mocha data, is 0.492885873656182. This value is well above the common cutoff for significance (0.05), so it does not indicate statistical significance for the contrast tested.

exactMatch

855886c9-1b68-499f-9b6c-a15a1026882a

Using data from mocha, what is the effect size and adjusted p-value (padj) for the association of 'Obesity' with the gene CNOT9 under the 'Obese_vs_Lean' contrast?

Based on the data from mocha, the effect size for the association of 'Obesity' with the gene CNOT9 (contrast: Obese_vs_Lean) is 0.345145211241505, and the adjusted p-value (padj) is 0.0772533280760196.

exactMatch

d5c7db08-fdbd-4d11-96e0-046535c0b25b

Using data from mocha, what is the effect size and adjusted p-value for the association between BMI and the gene THSD7A?

From the mocha dataset, for the contrast with BMI and the gene THSD7A, the effect size is 0.0107329551867226 and the adjusted p-value (adj.P.Val) is 0.239436538591421.

exactMatch

aef7ccd2-cc2f-42c3-ab32-0de2689449fd

Using the mocha dataset, what was the effect size of BMI on CCL14 expression, and what were the confidence interval bounds for this effect?

According to the mocha data, the effect size of BMI on CCL14 expression was 0.0073247563981738, with a confidence interval ranging from -0.0086968567173942 (lower bound) to 0.023346369513742 (upper bound).

exactMatch

ebbd573a-4e1b-4b26-b9cc-65197c17641a

Using the provided data from mocha, what is the estimated effect size and its 95% confidence interval for the association between the gene NPPB and 'LDL - Cholesterol 3'?

According to the mocha data, the estimated effect size for the association between gene NPPB and 'LDL - Cholesterol 3' is 0.00252, with a 95% confidence interval ranging from -0.3131 to 0.3181.

exactMatch

4e25cbbf-1cbf-4c46-94e1-181c5cf63b8e

Based on data from mocha, what is the effect size and adjusted p-value for the association between the feature 'seq.6528.95' (gene EXTL2) and the term 'HDL - Cholesterol 4'?

According to the data from mocha, the effect size for the association between feature 'seq.6528.95' (gene EXTL2) and 'HDL - Cholesterol 4' is -0.120023864725768. The adjusted p-value (adj.P.Val/padj) for this association is 0.0094465104188019.

exactMatch

389468e0-ea76-4356-874c-c504f2cb8437

Using the data from mocha, what is the adjusted p-value (padj) for the association between BMI and expression of the gene CSTPP1, and is this association statistically significant?

The adjusted p-value (padj) for the association between BMI and expression of CSTPP1, according to mocha, is 0.0816476889334655. This value is above the commonly used threshold of 0.05, so the association is not considered statistically significant after adjustment.

exactMatch

b8f7a9bb-b0a3-4a52-b53c-97bbd4d79eac

Using data from mocha, what is the adjusted p-value for the association between 'Glycerol - GLY' and the gene 'IL5', and is this association considered statistically significant?

The adjusted p-value for the association between 'Glycerol - GLY' and the gene 'IL5' from mocha is 0.464672208464056. Since this value is greater than the common significance threshold of 0.05, the association is not considered statistically significant.

exactMatch

87e34bef-61e6-49c8-9f18-4fb35963cead

Using the data from mocha, what is the effect size of the gene PTS in the cholesterol - CHOL2-I contrast, and is this result statistically significant?

According to the mocha data, the effect size for the gene PTS in the cholesterol - CHOL2-I contrast is -0.0062132675797879. The adjusted p-value is 0.985112268226404, which indicates that the result is not statistically significant.

exactMatch

3e13ced6-05fe-44f4-aafd-5a3954a8b270

Based on mocha data for the gene ANGPTL4, what is the effect size of its association with 'LDL - Cholesterol 3', and is this association statistically significant?

From the mocha data, the effect size of ANGPTL4 with respect to 'LDL - Cholesterol 3' is -0.0263492910162372. The p-value is 0.154029012873396 and the adjusted p-value is 0.462330859080047, indicating that this association is not statistically significant.

exactMatch

c94ddf59-1bbb-4282-96fa-93a153fa5019

According to the data from mocha, what is the p-value and adjusted p-value (padj) for ARFIP1 in the 'Glycerol - GLY' contrast, and what do these values suggest about statistical significance?

The p-value for ARFIP1 in the 'Glycerol - GLY' contrast from mocha is 0.200193962302679, and the adjusted p-value (padj) is 0.428970224198174. These values are both greater than the common significance threshold of 0.05, suggesting that the observed effect is not statistically significant.

exactMatch

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