Datasets:
longevity-db
/
mouse-muscle-aging-atlas-snRNAseq

Dataset card Data Studio Files
xet
Community
SampleID
stringclasses
15 values
MouseID
stringclasses
8 values
Age_bin
stringclasses
2 values
Sex
stringclasses
1 value
batch
stringclasses
2 values
annotation
stringclasses
25 values
10X_version
stringclasses
1 value
n_counts
float32
217
20k
⌀
n_genes
float32
200
4.96k
⌀
mito_per
float32
0
0.2
⌀
scrublet_score
float32
0
0.44
⌀
n_genes_by_counts
int64
191
4.85k
⌀
total_counts
float32
15.8
590k
⌀
total_counts_mt
float32
0
55.3
⌀
pct_counts_mt
float32
0
7.12
⌀
cell_id
stringlengths
22
22
⌀
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
5,237
2,300
0.029788
0.073134
2,259
3,180.397949
28.225397
0.88748
AAGCCGCAGAAGCCCA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,883
1,070
0.057886
0.134426
1,053
2,210.164795
35.089359
1.587636
AAGCCGCAGAATTCCC-1-0-0
5386STDY7599667
Donor4
old
M
cells
MuSC
3'v2
2,393
900
0.033013
0.022549
885
1,825.026489
31.944626
1.750365
AAGCCGCAGACTCGGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,841
1,391
0.033791
0.141884
1,355
2,480.959229
30.136333
1.214705
AAGCCGCAGAGCTATA-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
3,416
1,435
0.042447
0.099196
1,406
2,371.249268
35.959576
1.516482
AAGCCGCAGATATGGT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,295
748
0.032432
0.127503
738
1,805.008667
27.034121
1.497728
AAGCCGCAGCCAGGAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,068
1,074
0.01354
0.037643
1,058
2,187.13501
23.05051
1.053913
AAGCCGCAGCCAGTTT-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
3,902
1,690
0.052281
0.278626
1,660
2,670.018066
35.606884
1.333582
AAGCCGCAGCTCCTCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
3,890
1,777
0.025964
0.10942
1,751
2,816.891846
28.457541
1.010246
AAGCCGCAGGCCCGTT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,438
846
0.04242
0.092308
831
1,948.08252
34.26968
1.759149
AAGCCGCAGTACTTGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
mSchwann
3'v2
1,840
963
0.061413
0.016645
944
2,026.831543
35.779091
1.765272
AAGCCGCAGTTATCGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
MuSC
3'v2
3,361
1,253
0.023207
0.031762
1,231
2,150.932617
26.424305
1.228505
AAGCCGCCACATGGGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
5,167
2,182
0.017805
0.022549
2,140
3,075.310059
24.565178
0.798787
AAGCCGCGTACCGTTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,306
1,218
0.026019
0.092308
1,193
2,364.007568
26.971979
1.140943
AAGCCGCGTCAGTGGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,466
926
0.0191
0.069869
908
2,078.299805
24.505575
1.179116
AAGCCGCTCAGTCCCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,589
1,152
0.068752
0.060976
1,132
2,179.48877
40.895493
1.87638
AAGCCGCTCCAGTATG-1-0-0
5386STDY7599667
Donor4
old
M
cells
SMC
3'v2
4,991
1,830
0.104989
0.053232
1,801
2,607.388916
43.895763
1.683514
AAGCCGCTCCCATTTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
967
570
0.154085
0.062371
560
1,488.126831
43.650047
2.933221
AAGCCGCTCGGATGTT-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
1,564
878
0.037084
0.158672
865
1,970.122925
29.612888
1.503098
AAGCCGCTCGTTTATC-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,218
749
0.041872
0.127503
734
1,806.306885
33.091137
1.831978
AAGCCGCTCTCTAAGG-1-0-0
5386STDY7599667
Donor4
old
M
cells
Pericyte
3'v2
6,613
2,684
0.035082
0.163317
2,642
3,372.956787
32.205662
0.95482
AAGCCGCTCTGGTGTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
3,528
1,530
0.037982
0.059612
1,505
2,571.553711
36.304947
1.41179
AAGGAGCAGAGTGAGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,255
770
0.010359
0.121058
757
1,853.049805
14.917374
0.805017
AAGGAGCAGCCAACAG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,285
777
0.017899
0.106742
760
1,839.612305
25.990452
1.412822
AAGGAGCAGCCCTAAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
mSchwann
3'v2
1,741
952
0.055141
0.094536
933
2,040.699585
38.199318
1.871874
AAGGAGCAGCGTTGCC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,664
1,370
0.015015
0.141884
1,342
2,499.762207
22.234217
0.889453
AAGGAGCAGGAGTTGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
796
516
0.106784
0.112186
507
1,434.039917
39.729565
2.770464
AAGGAGCAGGTGTTAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
SMC
3'v2
2,369
1,213
0.119038
0.202363
1,195
2,295.967773
44.853058
1.953558
AAGGAGCCACGGCCAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
SMC
3'v2
5,471
2,106
0.07622
0.017757
2,071
2,859.719971
40.623329
1.420535
AAGGAGCCACTTCTGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
4,174
1,748
0.026114
0.138085
1,713
2,769.508057
26.07407
0.941469
AAGGAGCCAGACAGGT-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
6,455
2,483
0.050194
0.115044
2,438
3,108.358398
37.634087
1.210738
AAGGAGCCAGGATTGG-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
5,148
2,092
0.028361
0.073134
2,053
2,964.323975
33.198788
1.119945
AAGGAGCCAGTCACTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
4,935
2,131
0.019656
0.10942
2,095
3,022.507568
26.861931
0.88873
AAGGAGCGTAACGCGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,410
1,169
0.039834
0.104147
1,141
2,264.422119
35.091713
1.549698
AAGGAGCGTAGAGCTG-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,163
723
0.095443
0.043328
710
1,786.164673
45.179352
2.529406
AAGGAGCGTCACTGGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
3,896
1,795
0.026951
0.202363
1,761
2,838.118652
31.472309
1.108914
AAGGAGCGTCCATCCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
Tenoc
3'v2
6,176
2,067
0.037079
0.053232
2,035
2,727.747559
32.439358
1.189236
AAGGAGCGTGTGAATA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,040
722
0.049038
0.138085
711
1,805.839233
33.461113
1.85294
AAGGAGCTCATACGGT-1-0-0
5386STDY7599667
Donor4
old
M
cells
mSchwann
3'v2
3,077
1,470
0.046474
0.014517
1,444
2,535.35083
33.479736
1.320517
AAGGAGCTCCGAAGAG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,844
1,060
0.022234
0.138085
1,047
2,233.320313
26.334095
1.179145
AAGGAGCTCTCCAACC-1-0-0
5386STDY7599667
Donor4
old
M
cells
Tenoc
3'v2
4,108
1,553
0.037975
0.055699
1,533
2,450.905762
37.369667
1.524729
AAGGCAGAGAGTACCG-1-0-0
5386STDY7599667
Donor4
old
M
cells
Pericyte
3'v2
767
564
0.091265
0.032558
555
1,548.821411
39.595581
2.556498
AAGGCAGAGCGCCTCA-1-0-0
5386STDY7599667
Donor4
old
M
cells
mSchwann
3'v2
1,303
716
0.072141
0.026557
705
1,723.993896
37.638176
2.183197
AAGGCAGAGGTTACCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
3,758
1,647
0.028739
0.134426
1,615
2,638.591553
31.368877
1.188849
AAGGCAGAGTTCGCGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
mSchwann
3'v2
4,657
2,155
0.042087
0.173228
2,112
3,104.921631
33.48584
1.078476
AAGGCAGCAAAGGAAG-1-0-0
5386STDY7599667
Donor4
old
M
cells
nmSchwann
3'v2
3,003
1,511
0.039294
0.07657
1,479
2,598.508301
34.356201
1.322151
AAGGCAGCACATGGGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,713
1,025
0.022183
0.121058
998
2,184.642578
27.884474
1.276386
AAGGCAGCACGGTAGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,139
1,123
0.019168
0.058278
1,102
2,243.650391
26.475359
1.180013
AAGGCAGCACGTCAGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
nmSchwann
3'v2
2,411
1,299
0.035255
0.052038
1,267
2,422.129395
30.597046
1.263229
AAGGCAGCAGACGCAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,741
993
0.026996
0.101633
972
2,131.853516
29.021954
1.361348
AAGGCAGCAGATTGCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
Pericyte
3'v2
802
572
0.018703
0.034193
561
1,561.00061
20.002697
1.281402
AAGGCAGCAGGGTATG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,758
970
0.018771
0.121058
955
2,092.961914
25.504086
1.218564
AAGGCAGCATCACGAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,958
1,102
0.024515
0.127503
1,088
2,291.225098
26.988558
1.177909
AAGGCAGCATCCGTGG-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
592
328
0.170608
0.158672
328
991.343445
47.128922
4.754046
AAGGCAGGTAACGACG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,962
1,035
0.039246
0.138085
1,014
2,142.274658
32.467968
1.515584
AAGGCAGGTAACGTTC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,247
764
0.056135
0.10942
746
1,835.363403
33.730774
1.837825
AAGGCAGGTACCATCA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,225
1,084
0.036854
0.141884
1,070
2,170.855713
31.370892
1.445093
AAGGCAGGTAGAGGAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,740
912
0.044253
0.239865
899
1,978.997925
35.001499
1.768648
AAGGCAGGTCTTTCAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
Pericyte
3'v2
825
548
0.076364
0.085995
538
1,506.807617
37.551563
2.492127
AAGGCAGGTGCAGTAG-1-0-0
5386STDY7599667
Donor4
old
M
cells
VenEC
3'v2
5,703
2,185
0.033316
0.163317
2,148
2,963.898193
31.475885
1.061976
AAGGCAGGTGGGTCAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
Macrophage-LYVE1
3'v2
1,024
597
0.119141
0.127503
590
1,540.661377
40.745937
2.644704
AAGGCAGGTTGGTGGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
741
482
0.132254
0.055699
474
1,379.870972
42.474705
3.078165
AAGGCAGTCAAGGTAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,593
945
0.043942
0.078355
931
2,093.222412
29.493452
1.408998
AAGGCAGTCACATACG-1-0-0
5386STDY7599667
Donor4
old
M
cells
MuSC
3'v2
2,457
954
0.050468
0.032558
933
1,864.779907
36.585018
1.961895
AAGGCAGTCACCTTAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,920
990
0.084375
0.124224
976
2,072.519775
43.055298
2.077437
AAGGCAGTCTTACCGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,330
1,187
0.022318
0.178523
1,171
2,332.951904
27.321896
1.17113
AAGGTTCAGAAACGCC-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
1,038
646
0.081888
0.090143
636
1,646.778931
38.394577
2.331496
AAGGTTCAGAGACTTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
Tenoc
3'v2
1,040
591
0.0875
0.056974
579
1,522.514038
40.207207
2.640843
AAGGTTCAGAGCTATA-1-0-0
5386STDY7599667
Donor4
old
M
cells
VenEC
3'v2
1,944
1,063
0.049897
0.168164
1,043
2,183.459473
33.290657
1.524675
AAGGTTCAGAGCTTCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,019
687
0.023553
0.047505
667
1,733.174683
22.180387
1.279755
AAGGTTCAGATCTGCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,567
1,259
0.015972
0.195965
1,234
2,364.433838
25.547449
1.080489
AAGGTTCAGCACAGGT-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,307
787
0.025249
0.068296
775
1,875.08313
26.198311
1.397181
AAGGTTCAGCCTCGTG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,329
803
0.038375
0.092308
790
1,890.65686
31.447685
1.663321
AAGGTTCAGCGTCTAT-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,412
825
0.041076
0.053232
812
1,917.162842
32.181484
1.678599
AAGGTTCAGCTAGTTC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
688
483
0.053779
0.085995
478
1,402.393921
40.411758
2.881627
AAGGTTCAGGGAAACA-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,292
802
0.041022
0.118
791
1,899.673706
27.816011
1.464252
AAGGTTCAGTACATGA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,824
1,011
0.012061
0.141884
995
2,131.854248
17.680157
0.829332
AAGGTTCAGTCGTACT-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,503
872
0.033932
0.090143
859
1,993.445435
31.710106
1.590719
AAGGTTCAGTCGTTTG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
609
437
0.019704
0.052038
427
1,284.908203
18.106529
1.409169
AAGGTTCCAATCTGCA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
2,083
1,013
0.180509
0.071481
998
2,028.171387
44.635914
2.200796
AAGGTTCCACACCGCA-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
5,176
1,921
0.025502
0.104147
1,891
2,726.990723
28.540771
1.046603
AAGGTTCCACGAAATA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,844
977
0.021692
0.138085
962
2,085.011475
26.012724
1.247606
AAGGTTCCAGCTGTGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
Pericyte
3'v2
3,388
1,639
0.043388
0.092308
1,616
2,743.79126
34.178013
1.245649
AAGGTTCCAGGAACGT-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
1,737
968
0.010363
0.07483
948
2,088.547852
20.171549
0.965817
AAGGTTCCAGGACGTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,084
714
0.046125
0.173228
701
1,779.989868
28.775791
1.616627
AAGGTTCCATACTACG-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
3,181
1,494
0.020748
0.101633
1,475
2,577.313721
26.665112
1.034609
AAGGTTCCATTCACTT-1-0-0
5386STDY7599667
Donor4
old
M
cells
VenEC
3'v2
3,293
1,577
0.040996
0.223642
1,546
2,648.54126
35.638596
1.345593
AAGGTTCGTAGCGCAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
ArtEC
3'v2
2,684
1,388
0.010805
0.052038
1,364
2,541.159668
19.154268
0.753761
AAGGTTCGTCGAAAGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,494
894
0.023427
0.10942
881
2,010.317139
29.542242
1.469531
AAGGTTCGTGAACCTT-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
1,757
761
0.151964
0.03098
752
1,649.143555
47.887093
2.903755
AAGGTTCGTTACAGAA-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
4,735
1,997
0.027878
0.082072
1,958
2,879.162598
30.956917
1.075206
AAGGTTCTCCGTCATC-1-0-0
5386STDY7599667
Donor4
old
M
cells
mSchwann
3'v2
4,932
2,293
0.059205
0.130901
2,253
3,185.06958
35.672436
1.119989
AAGGTTCTCGCCAGCA-1-0-0
5386STDY7599667
Donor4
old
M
cells
VenEC
3'v2
2,199
1,299
0.043201
0.115044
1,275
2,525.756104
31.558538
1.249469
AAGGTTCTCGGCGCTA-1-0-0
5386STDY7599667
Donor4
old
M
cells
MuSC
3'v2
989
584
0.133468
0.011067
575
1,524.54126
44.66021
2.92942
AAGTCTGAGCTATGCT-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
1,734
988
0.031142
0.127503
970
2,116.295166
28.427378
1.343261
AAGTCTGAGCTGGAAC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
1,878
1,043
0.021299
0.104147
1,030
2,187.463867
24.542015
1.121939
AAGTCTGAGGCTAGAC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
3,692
1,653
0.019231
0.130901
1,625
2,696.789307
26.092134
0.967526
AAGTCTGAGTCAAGCG-1-0-0
5386STDY7599667
Donor4
old
M
cells
FB
3'v2
3,399
1,595
0.047073
0.07483
1,567
2,637.405029
35.514992
1.346588
AAGTCTGAGTTATCGC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
3,484
1,569
0.013777
0.118
1,543
2,611.332275
21.296917
0.815557
AAGTCTGCAATCACAC-1-0-0
5386STDY7599667
Donor4
old
M
cells
CapEC
3'v2
634
428
0.080442
0.268022
422
1,282.266113
41.220665
3.214673
AAGTCTGCAATCTACG-1-0-0