The dataset viewer is not available for this split.
Error code: FeaturesError
Exception: ArrowInvalid
Message: JSON parse error: Invalid value. in row 0
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 160, in _generate_tables
df = pandas_read_json(f)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 38, in pandas_read_json
return pd.read_json(path_or_buf, **kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 791, in read_json
json_reader = JsonReader(
File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 905, in __init__
self.data = self._preprocess_data(data)
File "/src/services/worker/.venv/lib/python3.9/site-packages/pandas/io/json/_json.py", line 917, in _preprocess_data
data = data.read()
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 807, in read_with_retries
out = read(*args, **kwargs)
File "/usr/local/lib/python3.9/codecs.py", line 322, in decode
(result, consumed) = self._buffer_decode(data, self.errors, final)
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xff in position 0: invalid start byte
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/split/first_rows.py", line 228, in compute_first_rows_from_streaming_response
iterable_dataset = iterable_dataset._resolve_features()
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 3422, in _resolve_features
features = _infer_features_from_batch(self.with_format(None)._head())
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2187, in _head
return next(iter(self.iter(batch_size=n)))
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 2391, in iter
for key, example in iterator:
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1882, in __iter__
for key, pa_table in self._iter_arrow():
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 1904, in _iter_arrow
yield from self.ex_iterable._iter_arrow()
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 499, in _iter_arrow
for key, pa_table in iterator:
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 346, in _iter_arrow
for key, pa_table in self.generate_tables_fn(**gen_kwags):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 163, in _generate_tables
raise e
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py", line 137, in _generate_tables
pa_table = paj.read_json(
File "pyarrow/_json.pyx", line 308, in pyarrow._json.read_json
File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
pyarrow.lib.ArrowInvalid: JSON parse error: Invalid value. in row 0Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
ICIP 2022 Challenge: Parasitic Egg Detection and Classification
Parasitic infections have been recognised as one of the most significant causes of illnesses by WHO. Most infected persons shed cysts or eggs in their living environment, and unwittingly cause transmission of parasites to other individuals. Diagnosis of intestinal parasites is usually based on direct examination in the laboratory, of which capacity is obviously limited. Targeting to automate routine faecal examination for parasitic diseases, this challenge aims to gather experts in the field to develop robust automated methods to detect and classify eggs of parasitic worms in a variety of microscopic images. Participants will work with a large-scale dataset, containing 11 types of parasitic eggs from faecal smear samples. They are the main interest because of causing major diseases and illness in developing countries. We are open to any techniques used for parasitic egg recognition, ranging from conventional approaches based on statistical models to deep learning techniques. Finally, the organisers expect a new collaboration to come out from the challenge.
Instructions
The dataset contains 11 parasitic egg types. Each category has 1,000 images.
category_id |
Parasite Name |
|---|---|
| 0 | Ascaris lumbricoides |
| 1 | Capillaria philippinensis |
| 2 | Enterobius vermicularis |
| 3 | Fasciolopsis buski |
| 4 | Hookworm egg |
| 5 | Hymenolepis diminuta |
| 6 | Hymenolepis nana |
| 7 | Opisthorchis viverrine |
| 8 | Paragonimus spp |
| 9 | Taenia spp. egg |
| 10 | Trichuris trichiura |
Resources
Citation
Please cite the following paper if you use the dataset or methods after the competition:
N. Anantrasirichai, T. H. Chalidabhongse, D. Palasuwan, K. Naruenatthanaset, T. Kobchaisawat, N. Nunthanasup, K. Boonpeng, X. Ma and A. Achim, "ICIP 2022 Challenge on Parasitic Egg Detection and Classification in Microscopic Images: Dataset, Methods and Results," IEEE ICIP2022.
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